| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1164 |
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| Symbol | |
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| ID | 7386224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 987272 |
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| End bp | 988027 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643650630 |
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| Product | transcriptional regulator DeoR family |
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| Protein accession | YP_002548836 |
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| Protein GI | 222147879 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000280656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACTC ATCAACGCAA GGCTCTCATT CTCTCCCGTT TGCAACGCGA CGGACGGGTG
ATCGCCAAGG ATTTCGCCGC TGAACTCGAC CTGTCGGAGG ACACCGTTCG CCGTGACATG
CGCGACATGG CGGCAGCGGG ATTGCTGGCG CGCGTGCATG GCGGTGCGCT GCCGCTTTCA
CCGGATCTGC CGGATTTCTC GACCCGAAAA AGCCGGGCGG GCAGCGAGAA ACAGGCTTTG
GCAACCCGTG CCGTAGCGCT GGTTCAGCCG GGGCAGATGA TCTTTCTGGA TGGCGGCACC
ACCAATGCCG AAATTGCCCG GCTGCTGCCG CAAAATCTCG GCCTGACGGT GATGACCCAC
AGCCCGACCA TTGCCGTCGA GCTGGAACGA CGCAGCGATA TCGAGGTCAT CCTGATCGGC
GGGCGGCTCT ACCGGCATTC GATGGTGGCG GTGGGTGCAG TGGCGGCGGA AGCGATTGCA
AGGCTGCGCC CGCACCTGTT CTTCCTGGGT GCGACATCCG TCCACCCCCA GCATGGCGTC
ACCACTGGCG ATGCTGAGGA AGCGGCGATC AAACGGATAA TCGCCTCGGT CAGTGCGGAA
ACCTATCTCT GCCTGACCTC GGAAAAGCTG GATACACTGT CGCCCTGCCA GATTCTGCCA
CTGCCAGCCC TGGCGGGATT GATCGTCGGG CCCAGTGTGG AGGCGGAGCG TCTTACCCCC
TATCAGGCGA CAGGGATCGC GCTTTTCCAG GCATGA
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| Protein sequence | MLTHQRKALI LSRLQRDGRV IAKDFAAELD LSEDTVRRDM RDMAAAGLLA RVHGGALPLS
PDLPDFSTRK SRAGSEKQAL ATRAVALVQP GQMIFLDGGT TNAEIARLLP QNLGLTVMTH
SPTIAVELER RSDIEVILIG GRLYRHSMVA VGAVAAEAIA RLRPHLFFLG ATSVHPQHGV
TTGDAEEAAI KRIIASVSAE TYLCLTSEKL DTLSPCQILP LPALAGLIVG PSVEAERLTP
YQATGIALFQ A
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