Gene Avi_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1157 
Symbol 
ID7386217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp976771 
End bp977142 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content57% 
IMG OID643650623 
Producttransposase 
Protein accessionYP_002548829 
Protein GI222147872 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGTC GCCGGTTTGA TCTCACCGAT TTCGAATGGA CTGTCATCCA GCCCTTGTTG 
CCCAACAAGC CGCGTGGGGT GCCACGGGTT GACGACCGGC GGGTGATCAA CGGCATCTTG
TGGCGGTTTC GGACAGGTTC ACCCTGGGCA GACGTTCCTG ATCGATATGG TCCATATACA
ACCTGCTACA ACCGGTTCGT GCGATGGCGA AAGGCGGGTG TCTGGGATCA TGTTTTGGGC
GAGATTTCCA AGGCTTTCGA CGGCGATATC GTTATGATCG ACAGCTCCTG TGTCCGTGTT
CATCAACATG CGGCCACGGG AAAAAGGGGG ATCAACACGA TGGCTGCATG GGACGTTCCC
GTGGCGGCTT GA
 
Protein sequence
MTRRRFDLTD FEWTVIQPLL PNKPRGVPRV DDRRVINGIL WRFRTGSPWA DVPDRYGPYT 
TCYNRFVRWR KAGVWDHVLG EISKAFDGDI VMIDSSCVRV HQHAATGKRG INTMAAWDVP
VAA