| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1127 |
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| Symbol | |
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| ID | 7386198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 955384 |
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| End bp | 956241 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650603 |
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| Product | metallo-beta-lactamase superfamily protein |
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| Protein accession | YP_002548810 |
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| Protein GI | 222147853 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCATTA TCAATGGCGT CGAACGGGTT ACCGCCAATA ATCCTTCCGC CATGACCTAT
ATGGGCACGA ACACCTATAT CATCGGCGAA AAATCAGTTT GTGTGATCGA TCCCGGCCCC
GATAACCCTG CGCATTTCCA TGCTTTGCAA TTGGCGCTGC GCGGTCGTGA GGTTAGCCAC
ATCATCGTCA CCCATACCCA TCGCGACCAT TCCGGCCTTG CCCTGCGGCT GCAAGACCTG
ACCGGCGCAA AGCTGGTGGC GGAGGGCCGA CACCGGCTGG CGCGCCCCTT GCACCCCGGT
GAGGCGGCAG CCTTTACCGA AAGCGGCGAC CGCGATTTCA CCCCCGACCT CACCCTTGGC
GACACCGAGC GGCTGGAGGG AGACGGCTGG ACACTGGAAA CCGTGCTGAC CCCCGGCCAT
GCCGCCAACC ATGCCGCCTT CGCGCTTGCT GGAACCGGCA TCCTGTTTTC CGGCGATCAT
GTCATGGCCT GGGCGTCAAC GGTGATTGCG CCACCCGACG GATCGATGCG CGATTACATG
GCCTCGCTGG ATGTTCTGCT GGCGCGCGAC GACCTTGCCT ATTTGCCCGG GCATGGCGGG
CCGGTTCTGT CTCCCCTCGA CCACGTCTCC CGGCTGAAAG GCCATCGACT GAACCGCGAA
GAGACCATTC TTGGCCGCGT TCAGGCCGGA GACAGGACGA TAGACGAGAT GTTGGCCGCC
ATTTACCACA ATATCAGTCC CGATCTCTAT AAGCCCGCTG CCTTGTCTAT TCTGGCGCAT
CTGGAAGATC TGGTGGCAAG GGGCGCTGTC CAATGCGAAG GGCCAGCCTT GGCCGACAGC
CGGTTTCACC CGGCTTGA
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| Protein sequence | MPIINGVERV TANNPSAMTY MGTNTYIIGE KSVCVIDPGP DNPAHFHALQ LALRGREVSH
IIVTHTHRDH SGLALRLQDL TGAKLVAEGR HRLARPLHPG EAAAFTESGD RDFTPDLTLG
DTERLEGDGW TLETVLTPGH AANHAAFALA GTGILFSGDH VMAWASTVIA PPDGSMRDYM
ASLDVLLARD DLAYLPGHGG PVLSPLDHVS RLKGHRLNRE ETILGRVQAG DRTIDEMLAA
IYHNISPDLY KPAALSILAH LEDLVARGAV QCEGPALADS RFHPA
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