| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1104 |
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| Symbol | |
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| ID | 7386182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 934298 |
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| End bp | 935749 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643650586 |
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| Product | hypothetical protein |
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| Protein accession | YP_002548794 |
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| Protein GI | 222147837 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4961] Flp pilus assembly protein TadG |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTTA AAGACCTGCT TTCAAAATTC ATCGCTGATG ACAATGGCAA TTTTGCCATC
ATGTCGGCCA TTCTGCTGAT GCCGTTGCTT TTGGCCGTCG GTGCGGCGGT GGACTACAGT
TCAGCGCGGG ATCATCGCAA CGATATTCAG GTAACCGCCG ATTCGGCTAT CCTGGCTGCG
GCGTCGAGCT ATTCCTCGTC TTCCGGCGTT GATTCCCTGG CAGCTGGGAT CGACAGCTAT
CTTGATTCCA AATTGACGGA TCAGGGTTCC AATGACGTCG ATACCGCCGC AGTGCCCAAG
CGGTTAAGTG GGCCGACCTT GTCGGCGGAT GGCAAGGAAA TCTGCATTGT CGTTGGCGAA
GGCGTTCCGA CCAGTTTCAT GCAACTGGCC GGGGTCAAGA CCGTAGACGT CTCCGCCAAA
TCCTGTGCAG CGCTGCCGGG CAATATTGAT CTCGAAGTGT CCCTGGTGCT CGACGTCTCC
AGCTCGATGA TCGAGGAAGG TCGTTTTGTG CCGATGCAGA CGGCAGTGAA GAGCTTTTTG
ACCTCTTTTG CCAATGATGC CACGGTTGCC AAACGCAGCA AGATTGCCAT CGCGCCGTTT
TCCAGCCGTT TCAACATTGG CCTCACCCAT AAGGACTGGT TGAAGGCTTA TGGTGGCAAT
GATGCCGTTC CTAGCCGTTG GACCGATCCC AAGTCCTATT ATAAGGACTC GAAATATAGT
TTCAGCCAGT GGATCGATAA TGTCACGACG CTGGCCTATA CCTCCAGTAA TTATTACTGG
ATTGGCTGCG TCGAGCCGCG CGCCGACGTG GAAATGAAGG ATAATGGTGC CATCGGTACC
TACGGCCTGA GCGATGCGCC ACCCAGCACC GAGGCTTTCG TGGCGCAGGA TTACAACACC
GGCTCTTCCA CCAGCTTCTG CCCGCCGCCC ATCGTTCCCC TGACATCGAG CTTTAGTACG
TTGCAAAGCG CTATCGCGGA CATGACATCA GAAGGCTCCA CCCGGCTCGA TGCCGGGATG
CTGGCGGGCT GGTATACGCT GTCGCCCAAA TGGCGTTCGG CATGGGGTGG TGGGACCGCG
CCCGCCGACT ATTCCGAGAA GGTCAAGAAG GTCATTGTTT TCATGACCGA TGGTGAGATG
AATGTGAAAT TTGGTTCCAC GGACCCTGCC AAGAGCAGTA CCGAAAAGCT GGACTGGATT
TGTGATAAAA ACCGCACAAA ATCCTGCAAT GACACTGCCA CCAATGCGCT TCTGACAACT
TGCGACTCGA TCAAATCCAA CAATATCGAG ATTTACGCGA TTTCCTATAG TTCGGAAGCC
GATGTCCAGA ATTTGCAGAC CTGTTCCAGC GGCACCAAAT ATTACTTCAG CGCCTCCACC
ACCAATATCA AGGATGTCTA TACGGCGATC TCCAAGAACA TTATCGGCAG TACGGTGCGG
CTGACGCAGT GA
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| Protein sequence | MRFKDLLSKF IADDNGNFAI MSAILLMPLL LAVGAAVDYS SARDHRNDIQ VTADSAILAA
ASSYSSSSGV DSLAAGIDSY LDSKLTDQGS NDVDTAAVPK RLSGPTLSAD GKEICIVVGE
GVPTSFMQLA GVKTVDVSAK SCAALPGNID LEVSLVLDVS SSMIEEGRFV PMQTAVKSFL
TSFANDATVA KRSKIAIAPF SSRFNIGLTH KDWLKAYGGN DAVPSRWTDP KSYYKDSKYS
FSQWIDNVTT LAYTSSNYYW IGCVEPRADV EMKDNGAIGT YGLSDAPPST EAFVAQDYNT
GSSTSFCPPP IVPLTSSFST LQSAIADMTS EGSTRLDAGM LAGWYTLSPK WRSAWGGGTA
PADYSEKVKK VIVFMTDGEM NVKFGSTDPA KSSTEKLDWI CDKNRTKSCN DTATNALLTT
CDSIKSNNIE IYAISYSSEA DVQNLQTCSS GTKYYFSAST TNIKDVYTAI SKNIIGSTVR
LTQ
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