| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1095 |
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| Symbol | smc |
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| ID | 7386175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 923756 |
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| End bp | 927217 |
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| Gene Length | 3462 bp |
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| Protein Length | 1153 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643650579 |
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| Product | chromosome segregation protein |
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| Protein accession | YP_002548787 |
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| Protein GI | 222147830 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.737485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTCA CCAAGCTTCG GGTCGTCGGC TTCAAATCCT TCGTTGAGCC CACCGAATTC
ATCATCGAGC GCGGATTAAC CGGCGTGGTC GGGCCGAACG GCTGCGGCAA GTCCAATCTG
GTCGAGGCGC TGCGCTGGGT GATGGGGGAA AACTCATATA AGAACATGCG CGCTTCCGGC
ATGGATGACG TGATTTTTTC CGGCTCCGGC AATCGCCCCG CCCGCAATTC GGCGGAGGTT
GGGCTTTATC TCGACAATTC CGACCGCACC GCGCCTGCTG CCTTTAACGA CAGCGACGAA
ATTCAGGTCA GCCGCCGTAT CGAGCGGGAA AACGGCTCGG TCTATCGCAT CAATGGCAAG
GAAGCCCGCG CCAAGGATGT GCAATTGCTG TTTGCCGATG CCTCGACTGG GGCGCGCTCG
CCGTCGATGG TCGGCCAGGG GCGGATTGGC GAACTCATCC AGGCCAAACC GCAGGCACGC
CGACAATTGC TGGAAGAGGC CGCTGGCATT TCCGGACTGC ATTCGCGCCG CCATGAGGCG
GAACTGCGGT TGCGCGCCGC CGAAACCAAT CTGGAGCGGC TGGAGGATAT TGTCGCCCAG
CTGGAAAGCC AGATCGAGAG CCTGAAGCGC CAGGCCCGGC AGGCCAATCG CTTCAAGATG
CTGTCCGCTG ATATCCGCGC CCGCGATGCC ATGCTGCTGC ATATCCGCTG GACGGAAGCG
CGGCAGGCCG AGGCTGAGGC GGAAGCCTCG CTCAACGAAA CGACCTCGCT GGTGGCCGAA
CGGGCGCAGG CGCAGATGGA AGCGGCCAAG GCCCAAGCCA TTGCCAGCCT GCAATTGCCT
GCGTTGCGTG ACGAAGAGGT CAAGGCCGCA GCCAGCCTGC AACGCTTGCA GATTGCCCGC
AGCCAGCTGG AGGAAGATGC CGGACGGCTG TTCAAGCGCC GCGACGAACT GACCCGCCGG
CTGTTGCAGC TTGAAGAGGA CATTGCCCGC GAGCAACGGC TGGTCGATGA CAATGCCGAA
ATTCTCGAGC GGCTCGCTGC CGAGGAAGCC GAACTGGAAG ACGTGCTGAC GGAAAGCGGT
CAGGAGGCCG ACGATCTGCG CATTGCTTTC GAGGAAGCAT CGGCAACCCT TGCTGACAGC
GAAGCCCGCT TTTCCGCCGC CACTGCTGAC CGCGCCGAGG CGGCAGCCGG GCGCAACCAG
CTGGAACGGG CGCTGCGCGA CCTCGCCGAC AAGCGGCTGC GGCTGGAGCG TCAGGCCGAC
GAGGCAGGCC GTGAACTGGA TGCCGTGGCC GAAAAGCTCT CTGCCCTGCC GGACCCGGAG
GAAAAGCGCG AGGCGGTGGA AGCCGGTGAA TATGCGGTGG AAGAGGCCGA AAGCACGGTT
GCGCAAGCGG AAGAGGCTTT AAGCGCCGCG CGCCTGGCCG AGGCACTGGC CCGTGGCCCG
GTGGAAGCCG CCCGCTCTGC ATTGGCGGCG CTGGAAACCG AGGCAAAAAC CATTGCCAAA
ATGCTGGCCT CTTCGGCCAG CGCCGGAGAA TTTTCGCCGG TGGCCGATGC ACTGACGGTG
GAGCGCGGTT TTGAAACCGC GCTGGGTGCC GCCCTTGGCG ACGATCTGGA AAGCCCGCTC
GACGCACAGG CTCCCGCCCA TTGGGCCATG CCCGGGCCGG ATGGTGATGA TCCCGCTTTG
CCCGCTGGCA TCGTGGCGCT TGCAGCCCAT GTTTCCGCGC CGCAAGCGTT GTCCCGTCGC
CTGAAACAGA TCGGCATCAC CGATGCGGAT ACCGCGCAAC GCCTGCAACC GGATCTGAAA
ACCGGCCAGC GGCTGGTGAC GCGCGAAGGG GCCGTCTATC GCTGGGATGG CCATGTCACC
GGCTCCGAAG CGCCGAGTGC GGCGGCCCTT CGTCTTGCCC AGAAGAACCG TCTGAAGGCG
CTGGAGGAAG AGGTTGACGA GGCCCGCATC GGGCTGGAAG ACGCTGAAGA ACAATTGACG
GCAGCGCGTG AGGCGGTGAT GTCGAGCGAA GCGCGTCTTG GCGAAGGGCG TGAGCGCCAA
AGGTTGATCC TGCGTCAGCT GTCGGAAGCC CGCGAGGCGT TAAGCGCTGC CGAGCGGGCC
AGCGGCGATC TGCTACGCCG CCGCGCTGTG GTGGAAGAGG CGGTCAACGG TCTTCGCGCC
CAGATCGAAG AGGCTGAAAG CCTGGCCGAA GAAGCGCAGA TTGCCCTTGC CGATCAGGCC
GACCTGACGG CGCTGGACGA ACAATTGCGG CAATTACAGA TGGAGGTTGC CACCGGTCGC
GGATTGGTGG CCGAAGCCCG CGCCCGCCAT GAAGGGTTTG CCCGTGAAAA CGACCAGCGC
CAGCGCCGGA TCATGGCGAT CCGTCAGGAG CGGCAAAGCT GGGCGCAGCG TGCTGCAAGT
GCTGCCCAAC ATATCGCCAC GCTGAGGGAG CGCGAGGCGG AAGCCCGCGA CGAAATGGCC
GAGCTGGACG CTGCCCCCGA CGAATTCGAC GAAAAGCGCC GCCTGCTGAT GAGCGAGCTG
GACAAGGCCG AGAGCGCCCG CCGCGCCGCA GCAGACCGGT TGGTGGAAGC CGAAGCTCGC
CAGCGTCAGG CCGATCAGGT CGCCGCGAGC GCCTTGTCGG CGCTGGCCGA AGCCCGCGAG
CGCCGGGGCC GGGCGGAAGA ACGGTTGCTG TCTGGACGCG AGCGGCGCAA GGATGCCGAG
GCCCGTATTC AGGAAGCGCT CAATGTTGGC CCGCATGAGG CCTTCCGCCT GACCGGGCTG
AAAACCGATG ACGCGATCCC TGATCTGCGC GAGGTCGAGC GCGATCTGGA CCGCCTGAAA
ATCGAGCGCG AACGGCTGGG TGCCGTCAAC CTGCGCGCCG ATGAAGAGCA GAAGGAATTG
TCCGACAAGC TCGCCGCCCT GATCAAGGAG CGCGACGACG TGATCGACGC GATCCGCAAG
CTGCGGGGCG CGATCCAGAG CCTGAACCGC GAGGGCCGGG AACGGCTGGT GGCGGCTTTC
GACGTGGTCA ATGCGCAATT CCAGCGGCTG TTCACCCACT TGTTTAACGG CGGCACGGCG
GAATTGCAGC TGATCGAAAG CGACGATCCG CTGGATGCCG GCCTCGAAAT CCTCGCCCGT
CCGCCTGGCA AGAAGCCGCA GACCATGACA CTGCTATCGG GCGGCGAGCA GGCTTTGACG
GCGATGGCGC TGATTTTCGC GGTCTTCCTC ACCAATCCGG CTCCGATCTG CGTGCTTGAC
GAAGTGGACG CCCCGCTCGA CGACCACAAT GTCGAGCGCT ATTGCAACCT GATGGACGAA
ATGGCCGCCT CGACCCAGAC CCGTTTCGTG ATCATCACCC ACAACCCGAT CACTATGGCC
CGCATGAACC GGCTGTTCGG CGTCACCATG GCCGAACAGG GCGTCTCCCA GCTGGTGTCC
GTGGACTTGC AGACGGCGGA GCAATTGCGC GAGGCTGTGT GA
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| Protein sequence | MKFTKLRVVG FKSFVEPTEF IIERGLTGVV GPNGCGKSNL VEALRWVMGE NSYKNMRASG
MDDVIFSGSG NRPARNSAEV GLYLDNSDRT APAAFNDSDE IQVSRRIERE NGSVYRINGK
EARAKDVQLL FADASTGARS PSMVGQGRIG ELIQAKPQAR RQLLEEAAGI SGLHSRRHEA
ELRLRAAETN LERLEDIVAQ LESQIESLKR QARQANRFKM LSADIRARDA MLLHIRWTEA
RQAEAEAEAS LNETTSLVAE RAQAQMEAAK AQAIASLQLP ALRDEEVKAA ASLQRLQIAR
SQLEEDAGRL FKRRDELTRR LLQLEEDIAR EQRLVDDNAE ILERLAAEEA ELEDVLTESG
QEADDLRIAF EEASATLADS EARFSAATAD RAEAAAGRNQ LERALRDLAD KRLRLERQAD
EAGRELDAVA EKLSALPDPE EKREAVEAGE YAVEEAESTV AQAEEALSAA RLAEALARGP
VEAARSALAA LETEAKTIAK MLASSASAGE FSPVADALTV ERGFETALGA ALGDDLESPL
DAQAPAHWAM PGPDGDDPAL PAGIVALAAH VSAPQALSRR LKQIGITDAD TAQRLQPDLK
TGQRLVTREG AVYRWDGHVT GSEAPSAAAL RLAQKNRLKA LEEEVDEARI GLEDAEEQLT
AAREAVMSSE ARLGEGRERQ RLILRQLSEA REALSAAERA SGDLLRRRAV VEEAVNGLRA
QIEEAESLAE EAQIALADQA DLTALDEQLR QLQMEVATGR GLVAEARARH EGFARENDQR
QRRIMAIRQE RQSWAQRAAS AAQHIATLRE REAEARDEMA ELDAAPDEFD EKRRLLMSEL
DKAESARRAA ADRLVEAEAR QRQADQVAAS ALSALAEARE RRGRAEERLL SGRERRKDAE
ARIQEALNVG PHEAFRLTGL KTDDAIPDLR EVERDLDRLK IERERLGAVN LRADEEQKEL
SDKLAALIKE RDDVIDAIRK LRGAIQSLNR EGRERLVAAF DVVNAQFQRL FTHLFNGGTA
ELQLIESDDP LDAGLEILAR PPGKKPQTMT LLSGGEQALT AMALIFAVFL TNPAPICVLD
EVDAPLDDHN VERYCNLMDE MAASTQTRFV IITHNPITMA RMNRLFGVTM AEQGVSQLVS
VDLQTAEQLR EAV
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