Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1051 |
Symbol | |
ID | 7387135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 887723 |
End bp | 888094 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643650543 |
Product | hypothetical protein |
Protein accession | YP_002548751 |
Protein GI | 222147794 |
COG category | [S] Function unknown |
COG ID | [COG3759] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.555272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATAT TCTTAATTGC GACAGTTTTG GTCGTTCTTG TCATGCTGGA ACATATCTAC ATCATGGTGC TGGAAATGTT TCTCTGGACG ACACCGCGCG CCCGGAAAAT CTTCCGTAAA AGCCTGCAGG GCGCTGAAAC CACTCGGGTG ATGGCGGCCA ATCAAGGTCT TTATAATGGA TTTCTGGCCG CGGGCCTGTT CTGGGCACTT CTGCATCCGC TGCCGGCCAT GGGGCTCCAG CTCAAGGTAT TTTTTCTTGG CGCTGTGGTG GTTGCTGGCC TATATGGGGG GAGGACCGTG TCGCGGCGGA TCTTCTTCGT CCAGGCCGCG CCGGCAGCGA TTGCCCTGTT TTTGGTTTTA CTGGCTGGAT AA
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Protein sequence | MTIFLIATVL VVLVMLEHIY IMVLEMFLWT TPRARKIFRK SLQGAETTRV MAANQGLYNG FLAAGLFWAL LHPLPAMGLQ LKVFFLGAVV VAGLYGGRTV SRRIFFVQAA PAAIALFLVL LAG
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