| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1039 |
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| Symbol | coxB |
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| ID | 7387127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 880584 |
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| End bp | 881522 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650535 |
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| Product | cytochrome c oxidase subunit II |
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| Protein accession | YP_002548743 |
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| Protein GI | 222147786 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.866528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGTT TGGCCACGGG TCTGGTCACG GGGACGGCAA GGCTGATGGC AGGTCTGGCG
GGAGCGATGG TTCTCTGTCT CATGAGTGCC GTCGGTGCGA TGGCGGACCA GCCGGTTGAT
TGGCAGATCG ACCTGCAACC CCATGCCAGC CCGGTGATGG AGCAGATCCG CTGGTTCAAC
CATTACACCT TGTGGTTCAT CGTTCCGGTG ACGCTGCTGG TTCTCGCTCT GTTGATCATC
GTGGTCGTGC GGTTCAGGGC CAGCGCCAAT CCGGTTGCGT CGCGCACCAG CCACAATACC
GCGATTGAGA TTGTCTGGAC GCTCGGGCCG GTTCTTATCC TTTTCTTTCT CGCCATCCCG
TCCTTCAATT TGCTCACCTA TGAATTGACG ATTCCGGAAA AGCCCGACCT GACCATTAAG
GCGACGGCCA CCCAGTGGCA GTGGAACTAT GAATATCAGG GTGAAAAGCA GCTGGCTTTC
GACAGCTACC TTCTGAAGGA CCAGGATCGC GCCAGTGCTG GCAAGGAAGA TCACAAGATT
TATCCGCGTC TTCTGGCTGT TGACAATGAA ATGGTCTTGC CGGTTGGCAA GACGGTTCGC
ATGCTGGTGA CGGCAGCGCC TTCGGACGTG ATCCATTCCT TCGCCATGCC GTCTTTCGGC
GTCAAGATCG ACGCCGTGCC GGGCCGGTTG AATGAGACCT GGTTCCGCGT CGACCGCGAA
GGCCTGTTCT ACGGCCAGTG CTCGGAACTT TGCGGCAAGG ATCATGCGTT CATGCCGATC
GCCATCCGCG TCGTTTCGGC TGACAAATAC AATGCGTGGA TGACGGCGGC CGCAAGCGAT
CTTGGCGCGG CCAACAAGGC TTTGATGGCA GCGACGGATG GCCCGAAGGC CGCCAATCAG
CTGGCGCAGA ACGTTTCCAC AATGACCGTT TCGAACTGA
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| Protein sequence | MASLATGLVT GTARLMAGLA GAMVLCLMSA VGAMADQPVD WQIDLQPHAS PVMEQIRWFN
HYTLWFIVPV TLLVLALLII VVVRFRASAN PVASRTSHNT AIEIVWTLGP VLILFFLAIP
SFNLLTYELT IPEKPDLTIK ATATQWQWNY EYQGEKQLAF DSYLLKDQDR ASAGKEDHKI
YPRLLAVDNE MVLPVGKTVR MLVTAAPSDV IHSFAMPSFG VKIDAVPGRL NETWFRVDRE
GLFYGQCSEL CGKDHAFMPI AIRVVSADKY NAWMTAAASD LGAANKALMA ATDGPKAANQ
LAQNVSTMTV SN
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