Gene Avi_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0994 
SymbolmcpG 
ID7387093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp843382 
End bp845331 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content61% 
IMG OID643650501 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_002548709 
Protein GI222147752 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTC AGGATTTGTC CCTCAGCAAA AAACTCTACC TGACCTTCGT CGCGATCATG 
GCGGGGTGCT TCATTGCTTC TGCTGTCGTT TTTCTCCAGG GTCGGCAGGT CAAGGCGGCG
CTTGAGGAAC ATGCTCAGAT CGAACAGGTC GGTTATGCGC TGGATTTGAC GCTCCAGGCG
ATGCTGGAAG AGGCGGTCAA TCAACGGGGC TATCTGCTAT TGGGGTCCGA CAGCACCTAT
AAGGCCGTCT TCGACAGCCG CGACAAAATG TTGAAATCCC TGGACGATGC CCGCACTGCC
GCTGCCGGTC ATCAGGCCGT TCAGTCCATG CTGGACGATA TCAAGACGGC GGCCGACAGA
TTTCACACGC AATTGGTCTT GCCGCAACTG GAAGCCCGCA AGAGCGGGAA GACGGTGGAA
GAGATCACCC GTGTCTATGC GTCGAAAGGC GAGTTGGATG CGTTCCGCGA TGCTGCCGCC
AAGGCAAAGA CCGTTGTGGT GGCAATGGGC AACGAGCAAA GGGGAATCCA GCGCGATGCG
CAGTCGCGTC TTGAACTGGC GCTGCTGGCC GGTTGCGCGC TGGCCGGTGG CTTGGCTGTC
TTGCTGATCT GGCTTCTGGC GCGCTCTATC GTCAACCCGA TCACCGGTAT GACTGTCGCG
ATGAGCAAAC TGGCGTCCGG CGATCACGGG GTCGATGTCC CCGCCATCAA CCGGGGCGAT
GAAGTGGGCC GGATGGCAAA GGCCGTTTTG GTCTTCAAGG ATGCGGCGAT TGAAAAACTG
CGCCTGACCC AGGAAACCGA TAGCATGCGC CGCCGCTCTG AGGATGAGCA GCAGGCCGCC
CAGGCCCAGA AGCAACAGGA AGCCGACGAG ATTTCGTTTG TCGTCGTGCA ATTGGCGGAA
GGGCTTGCGG CGCTCGCCAA TGGCAATGTT GCTCACCGCC TCACGGTACC CTTTGTCGAG
CGGCTGGATG GGCTACGGGT GAATTTCAAC GAATCCCTTT CCAAGCTCCA GGCGGCCTTG
AAGACGGTGG GTGCCAATGC CCAGGCGATC AATGCCGGGG CGGCGGAAAT TCGCGCCTCG
GCGGACGATC TGGCCAAGCG GACCGAGCAG CAGGCGGCCT CGGTGGAAGA GACCGCAGCC
GCCCTTGAAC AGGTTACGCG CACGGTGAAA GACAGCGCAC GGCGCGCCGA AGATGTCGGC
CAGCTGGTGG CCACCACCCG CACCGGCGCT GAACGCTCCG GCCAGGTGGT GAGAAACGCC
GTGGCTGCCA TGACCGAGAT CGAGAAATCC TCCGGCGAAA TCGGCAATAT CATCGGTGTC
ATCGAGGATA TTGCCTTCCA GACCAATCTT CTGGCGCTCA ATGCCGGCGT GGAAGCGGCC
CGTGCTGGCG AGGCAGGCAA GGGATTTGCC GTGGTAGCAC AGGAAGTGCG GGCCTTGGCC
GAGCGCTCTG CCAAGGCCGC CAAGGAAATC AAGGTTTTGA TTAGCGCATC CTCCGCCCAG
GTTGGGGCTG GCGTGTCGCT GGTCGGAGAG ACCGGTCGCG AACTGGAGCA GATCGTCACC
GCCGTCCAGC ACATCAGCGA AAATGTCGCG GCCATCGTCA CCGCCTCGCG GGAGCAATCG
ACGGGTCTCT CGGAGATCAA CGTGGCTGTC ACCGACATGG ACAAGGGCAC ACAGCAAAAC
GCCGCCATGG TGGAAGAACA GACCGCAGCC AGCCATACGC TCGCCACGGA GGCCGATGCA
CTGATGGATC TGTTGCGCCA GTTCAAGCTG GAGGATGGCC CGGGGGTGGC CCAATATACC
GCCTCGGCGG GTCCGGCTCA TCCTGTCTCC AGCGCTGCAT CGCAGCGTCC GGTTTCCTCT
CCGGCTCGCT CGCTTGTTTC CAAGCTCGGC AAGGCCTTTG GGGGCGGCAC AGCGGCAGCC
GCCGTCAAAC AGGAATGGTC GGAATTCTAG
 
Protein sequence
MSFQDLSLSK KLYLTFVAIM AGCFIASAVV FLQGRQVKAA LEEHAQIEQV GYALDLTLQA 
MLEEAVNQRG YLLLGSDSTY KAVFDSRDKM LKSLDDARTA AAGHQAVQSM LDDIKTAADR
FHTQLVLPQL EARKSGKTVE EITRVYASKG ELDAFRDAAA KAKTVVVAMG NEQRGIQRDA
QSRLELALLA GCALAGGLAV LLIWLLARSI VNPITGMTVA MSKLASGDHG VDVPAINRGD
EVGRMAKAVL VFKDAAIEKL RLTQETDSMR RRSEDEQQAA QAQKQQEADE ISFVVVQLAE
GLAALANGNV AHRLTVPFVE RLDGLRVNFN ESLSKLQAAL KTVGANAQAI NAGAAEIRAS
ADDLAKRTEQ QAASVEETAA ALEQVTRTVK DSARRAEDVG QLVATTRTGA ERSGQVVRNA
VAAMTEIEKS SGEIGNIIGV IEDIAFQTNL LALNAGVEAA RAGEAGKGFA VVAQEVRALA
ERSAKAAKEI KVLISASSAQ VGAGVSLVGE TGRELEQIVT AVQHISENVA AIVTASREQS
TGLSEINVAV TDMDKGTQQN AAMVEEQTAA SHTLATEADA LMDLLRQFKL EDGPGVAQYT
ASAGPAHPVS SAASQRPVSS PARSLVSKLG KAFGGGTAAA AVKQEWSEF