Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0994 |
Symbol | mcpG |
ID | 7387093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 843382 |
End bp | 845331 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643650501 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_002548709 |
Protein GI | 222147752 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTTTTC AGGATTTGTC CCTCAGCAAA AAACTCTACC TGACCTTCGT CGCGATCATG GCGGGGTGCT TCATTGCTTC TGCTGTCGTT TTTCTCCAGG GTCGGCAGGT CAAGGCGGCG CTTGAGGAAC ATGCTCAGAT CGAACAGGTC GGTTATGCGC TGGATTTGAC GCTCCAGGCG ATGCTGGAAG AGGCGGTCAA TCAACGGGGC TATCTGCTAT TGGGGTCCGA CAGCACCTAT AAGGCCGTCT TCGACAGCCG CGACAAAATG TTGAAATCCC TGGACGATGC CCGCACTGCC GCTGCCGGTC ATCAGGCCGT TCAGTCCATG CTGGACGATA TCAAGACGGC GGCCGACAGA TTTCACACGC AATTGGTCTT GCCGCAACTG GAAGCCCGCA AGAGCGGGAA GACGGTGGAA GAGATCACCC GTGTCTATGC GTCGAAAGGC GAGTTGGATG CGTTCCGCGA TGCTGCCGCC AAGGCAAAGA CCGTTGTGGT GGCAATGGGC AACGAGCAAA GGGGAATCCA GCGCGATGCG CAGTCGCGTC TTGAACTGGC GCTGCTGGCC GGTTGCGCGC TGGCCGGTGG CTTGGCTGTC TTGCTGATCT GGCTTCTGGC GCGCTCTATC GTCAACCCGA TCACCGGTAT GACTGTCGCG ATGAGCAAAC TGGCGTCCGG CGATCACGGG GTCGATGTCC CCGCCATCAA CCGGGGCGAT GAAGTGGGCC GGATGGCAAA GGCCGTTTTG GTCTTCAAGG ATGCGGCGAT TGAAAAACTG CGCCTGACCC AGGAAACCGA TAGCATGCGC CGCCGCTCTG AGGATGAGCA GCAGGCCGCC CAGGCCCAGA AGCAACAGGA AGCCGACGAG ATTTCGTTTG TCGTCGTGCA ATTGGCGGAA GGGCTTGCGG CGCTCGCCAA TGGCAATGTT GCTCACCGCC TCACGGTACC CTTTGTCGAG CGGCTGGATG GGCTACGGGT GAATTTCAAC GAATCCCTTT CCAAGCTCCA GGCGGCCTTG AAGACGGTGG GTGCCAATGC CCAGGCGATC AATGCCGGGG CGGCGGAAAT TCGCGCCTCG GCGGACGATC TGGCCAAGCG GACCGAGCAG CAGGCGGCCT CGGTGGAAGA GACCGCAGCC GCCCTTGAAC AGGTTACGCG CACGGTGAAA GACAGCGCAC GGCGCGCCGA AGATGTCGGC CAGCTGGTGG CCACCACCCG CACCGGCGCT GAACGCTCCG GCCAGGTGGT GAGAAACGCC GTGGCTGCCA TGACCGAGAT CGAGAAATCC TCCGGCGAAA TCGGCAATAT CATCGGTGTC ATCGAGGATA TTGCCTTCCA GACCAATCTT CTGGCGCTCA ATGCCGGCGT GGAAGCGGCC CGTGCTGGCG AGGCAGGCAA GGGATTTGCC GTGGTAGCAC AGGAAGTGCG GGCCTTGGCC GAGCGCTCTG CCAAGGCCGC CAAGGAAATC AAGGTTTTGA TTAGCGCATC CTCCGCCCAG GTTGGGGCTG GCGTGTCGCT GGTCGGAGAG ACCGGTCGCG AACTGGAGCA GATCGTCACC GCCGTCCAGC ACATCAGCGA AAATGTCGCG GCCATCGTCA CCGCCTCGCG GGAGCAATCG ACGGGTCTCT CGGAGATCAA CGTGGCTGTC ACCGACATGG ACAAGGGCAC ACAGCAAAAC GCCGCCATGG TGGAAGAACA GACCGCAGCC AGCCATACGC TCGCCACGGA GGCCGATGCA CTGATGGATC TGTTGCGCCA GTTCAAGCTG GAGGATGGCC CGGGGGTGGC CCAATATACC GCCTCGGCGG GTCCGGCTCA TCCTGTCTCC AGCGCTGCAT CGCAGCGTCC GGTTTCCTCT CCGGCTCGCT CGCTTGTTTC CAAGCTCGGC AAGGCCTTTG GGGGCGGCAC AGCGGCAGCC GCCGTCAAAC AGGAATGGTC GGAATTCTAG
|
Protein sequence | MSFQDLSLSK KLYLTFVAIM AGCFIASAVV FLQGRQVKAA LEEHAQIEQV GYALDLTLQA MLEEAVNQRG YLLLGSDSTY KAVFDSRDKM LKSLDDARTA AAGHQAVQSM LDDIKTAADR FHTQLVLPQL EARKSGKTVE EITRVYASKG ELDAFRDAAA KAKTVVVAMG NEQRGIQRDA QSRLELALLA GCALAGGLAV LLIWLLARSI VNPITGMTVA MSKLASGDHG VDVPAINRGD EVGRMAKAVL VFKDAAIEKL RLTQETDSMR RRSEDEQQAA QAQKQQEADE ISFVVVQLAE GLAALANGNV AHRLTVPFVE RLDGLRVNFN ESLSKLQAAL KTVGANAQAI NAGAAEIRAS ADDLAKRTEQ QAASVEETAA ALEQVTRTVK DSARRAEDVG QLVATTRTGA ERSGQVVRNA VAAMTEIEKS SGEIGNIIGV IEDIAFQTNL LALNAGVEAA RAGEAGKGFA VVAQEVRALA ERSAKAAKEI KVLISASSAQ VGAGVSLVGE TGRELEQIVT AVQHISENVA AIVTASREQS TGLSEINVAV TDMDKGTQQN AAMVEEQTAA SHTLATEADA LMDLLRQFKL EDGPGVAQYT ASAGPAHPVS SAASQRPVSS PARSLVSKLG KAFGGGTAAA AVKQEWSEF
|
| |