| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0988 |
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| Symbol | mcpA |
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| ID | 7387088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 837765 |
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| End bp | 839852 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643650496 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002548704 |
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| Protein GI | 222147747 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAGAA ATTTGAATCT GATGTCCAAG ATTCTGATCA CCGCATGTGC GGCTGTTGTC
TTGGTGCTGT GTGGATTTTC GTTCTATATT GATAATCTTC AGCGCTCGAC CATTGGTAAG
ACTGTGGCGG ACGAAATCAA TTCTTCCGGC CTGCAAGCCT CTGAAAGCAT TGCCAATTGG
CTGAACGCCC GCGTGATGCT GACGGAATTC GCAGGCCAGG CTGCCGGCAA GATCGGCACG
CCAGAGGGAA TTTTGACCGA GTTTGACAAT CCGGTGCTGC TGCGCGAATT CATGTCCACC
TATGTCGGCC ATCAAGCGGA TGGAAAGTTT ACCTCGGTTC CGTTCCAGCC TCTGCCGGAA
GGCTATGATC CCCGCATTCG TCCCTGGTAT CAAGGCGCGG TCAAGGCCAA TAAGGTCGTG
CTGACAGAGC CATATACCGA CGCATCAACA GGGCAGTTGA TCCTAAGTGC GGCGGTGCCG
GTGAAAAGAG AGGGCCAATT GTATGGCGTC GCTGCCAGCG ATTTCTCCTT GAAAACACTG
GTGGGCCTGA TCAAGGCGGT TGATATTGGC GGCAAGGGTT CGGCTTTTCT GGTCAACGGC
AATGGCACGA TTCTGGTTCA TCCGGATCAG GCGCTGGTCA CAAAGACGCT TTCGGATGTC
TTTCCGGCTG AAACACCGAA AATCGGTGGT GGCTTGGTGG AAAGCCAGTT CGCCGGCAAG
CCGGTGCTGG TCAACTTCTT GCCGATCAAG GGCCTGCCGG TCGATGGCTG GTATCTGGCA
CTGGTGGTGG ATGAGGCAAA GGCCTATGCC GCAATAGGCG AGTTCCGTCT TGCTGCCGTG
ATTGCCACGG TGATTGGCGT GATCGCCATG ATCGGTATTC TCGCTCTGGT GCTCTCGACC
CTGGTGGTAC GTCCTGTGGT GCAGATGACC ACGGCGATGA GCAAGCTGGC CGGTGGTGAT
GTGTCCGCCG CCATTCCCGA CGTGCAGCGC GGCGATGAGA TCGGCCAGAT GGGTGCGGCG
GTCGCTGTAT TCCGTGATAA CGCTATCGAG CGGGTTCGTC TGGAACGCGA GGCTGACTCG
ACCCGCACGA TGAGTGAACA GGAACGCCGC GAGCGAGAAG CCGCAAAAGC ACGTGAAGCA
GAACAGGTGT CCTTTGCGGT ACATGCGCTG GCTGATGGAC TTGGCAGGCT TGCCGATGGT
GATCTGGCCC ATAGTATCGA GACCCCTTTT GCCGGTGATC TTGAGCGGCT GCGCTTCGAC
TTCAATGCGG CGCTGGCCAA ACTACACGAC GCCATGGCCG CCGTTGGCCA AAACGCCAGA
CAGATTGATG GCGGAGCCAT GGAAATCCGC GCCTCGGCTG ATAATCTTGC ACGCCGTACA
GAACAGCAGG CCGCCTCGGT TGAGCAGACC GCAGCGGCGC TGGAAGAGGT GACAACGACC
GTCAGAGATA GTGCTCATCG CGCCGAAGAG GTTGGCCAGA TCGTGACCCG CGCCCGCAGC
GGGGCGGAAA AATCCGGCAA GATTGTTCAG AATGCTGTTA ATGCCATGGA AGCCATCGAG
ACATCCGCCA ACCAGATTTC CAACATTATC GGGGTGATTG ACGAAATCGC CTTCCAGACC
AATCTCCTGG CCTTGAACGC TGGCGTGGAA GCAGCCCGTG CTGGTGAGGC TGGCAAGGGA
TTTGCCGTTG TCGCCCAGGA AGTGCGCGAA CTGGCCCAAC GTTCGGCAAC GGCCGCCAAG
GAAATCAAGC AATTGATCCA GGTCTCGGGA GAGCAGGTGG CAAATGGCGT ATCGCTGGTA
AGCCAGACCG GTGAGGCACT GGACGGCATT ATCAATGAGG TTCAGGAAAT CAACAAGCAT
ATCAATGCTA TTGTTGTCGC CTCCCGTGAA CAGTCACAGG GATTGCAGGA AATCAACGCC
GCTGTGAATG TGATGGACCA GGGCACGCAA CAAAATGCCG CCATGGTCGA AGAGCAAACA
GCGGCAAGCC ATGGACTGGC GCAGGAAGCG GCTGCTCTGA CCGAATTGCT GGCGCAATTC
AGACTGGCCC GGGAGCCTGC AAACCTTACA CAACGGCGCG CCGCCTGA
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| Protein sequence | MARNLNLMSK ILITACAAVV LVLCGFSFYI DNLQRSTIGK TVADEINSSG LQASESIANW
LNARVMLTEF AGQAAGKIGT PEGILTEFDN PVLLREFMST YVGHQADGKF TSVPFQPLPE
GYDPRIRPWY QGAVKANKVV LTEPYTDAST GQLILSAAVP VKREGQLYGV AASDFSLKTL
VGLIKAVDIG GKGSAFLVNG NGTILVHPDQ ALVTKTLSDV FPAETPKIGG GLVESQFAGK
PVLVNFLPIK GLPVDGWYLA LVVDEAKAYA AIGEFRLAAV IATVIGVIAM IGILALVLST
LVVRPVVQMT TAMSKLAGGD VSAAIPDVQR GDEIGQMGAA VAVFRDNAIE RVRLEREADS
TRTMSEQERR EREAAKAREA EQVSFAVHAL ADGLGRLADG DLAHSIETPF AGDLERLRFD
FNAALAKLHD AMAAVGQNAR QIDGGAMEIR ASADNLARRT EQQAASVEQT AAALEEVTTT
VRDSAHRAEE VGQIVTRARS GAEKSGKIVQ NAVNAMEAIE TSANQISNII GVIDEIAFQT
NLLALNAGVE AARAGEAGKG FAVVAQEVRE LAQRSATAAK EIKQLIQVSG EQVANGVSLV
SQTGEALDGI INEVQEINKH INAIVVASRE QSQGLQEINA AVNVMDQGTQ QNAAMVEEQT
AASHGLAQEA AALTELLAQF RLAREPANLT QRRAA
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