| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0965 |
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| Symbol | ubiA |
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| ID | 7387748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 813939 |
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| End bp | 814892 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650476 |
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| Product | 4-hydroxybenzoate polyprenyltransferase |
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| Protein accession | YP_002548684 |
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| Protein GI | 222147727 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.291497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCG CCAGCGACAC CACCGCCCGC GTCCAGGACG CGCTTTCCGA TAATTGGGTC
TACCGCCTGC TGCCACGGGC GGTCTGGCCC TATGCGCAGC TGGCGCGCTG GGACCGGCCA
ATCGGCTGGG AATTGCTGAT GTGGCCGTGC TTCTGGTCAT CGGCGCTGGC AGCCAATTTT
CTTGCCTCCA GGGACGCGCT GCTGGTCTGG ACCTTCATCG CCCACCTCCT GCTGTTCTTT
GTTGGCGCCG TTGTCATGCG CGGTGCTGGC TGCACCTATA ATGATCTGGT CGATGAGACG
ATCGATATGG AAGTGGCCCG CACCCGTTCG CGCCCCTTGC CTTCGGGGCG GGTGACGCGG
GGCCAAGCCA AGCTGTTCAT CGTCGCGCAG TTGGTGGTGG GCGCTGCCGT GCTATTCTGC
TTCAACGGCT TTTCCATCCT GCTTGGCCTG GCGTCGCTGG CCATCGTGGT GATCTATCCC
TTCGCCAAGC GGTTTACCGA TTGGCCGCAG TTTTTCCTTG GTCTGGCTTT TTCCTGGGGT
GGGTTGATGG GCTGGGCCGG GTTGACCGGG TCGATGTCTA TCGCCGCCGT GCTGCTCTAT
ATCGCTGCCG TGGTCTGGAC CATTGGCTAT GACACGATCT ATGCCCATCA GGACAAGGAG
GACGACGCCC TGATTGGCGT GCGCTCCACC GCAAGGCTGT TTGCCGAGGA CACCAAGATC
TGGCTGACCG GATTTTACGG CGCGATGGGC CTGTTGCTGG CCCTGTCCTT CGTGCTGGCC
GGTGCCGGTT TCCCCGCCTA TCTCGGACTG CTGGTGGCGC TCGTTCTGCT CGGCTACCAG
ATCAAAGTGC TGGATATCCA TAATCCGGTT CAGTGTCTGG CGCTGTTCAA GCTGAATGGC
AAGGTTGGGC TGATTCTGTT CATCGGTCTG GTTGCTTCTA TTCCCTTCGC CTGA
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| Protein sequence | MSTASDTTAR VQDALSDNWV YRLLPRAVWP YAQLARWDRP IGWELLMWPC FWSSALAANF
LASRDALLVW TFIAHLLLFF VGAVVMRGAG CTYNDLVDET IDMEVARTRS RPLPSGRVTR
GQAKLFIVAQ LVVGAAVLFC FNGFSILLGL ASLAIVVIYP FAKRFTDWPQ FFLGLAFSWG
GLMGWAGLTG SMSIAAVLLY IAAVVWTIGY DTIYAHQDKE DDALIGVRST ARLFAEDTKI
WLTGFYGAMG LLLALSFVLA GAGFPAYLGL LVALVLLGYQ IKVLDIHNPV QCLALFKLNG
KVGLILFIGL VASIPFA
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