Gene Avi_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0958 
SymbolmcpA 
ID7387742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp804871 
End bp806703 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content61% 
IMG OID643650470 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_002548678 
Protein GI222147721 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATC TCAGGATTTC GCTGCAACTG TTCCTGTTGG TTGGCGGATT GATGGCGGCT 
TTCGCAATCG CGACATTCTT CCAGATCCGC TCCTCAGAGC AAACCATCTA TACCCAACGC
TATGAAATGC TGCGCACCGA GGTGGAAACC GCCATTTCGG TGATGAAGCT TTACAATGCC
AAGGAAGTGG CGGGCACCCT GTCGCGGGCC GATGCGCAAA AGCAGGCCTA TGAGACGATC
AATGCGCTGA AATTCGACCC GGACGGCTAT TTCTTCGGCT ACGACTATGA TGTGAACATG
CTGTTTCATC CCGATCCGAA ACGGGTCGGG CAGAACTTTA AAGGCAAAGC CGACAGCAAG
GGCTTTGCCT ATCGCGACGA ACTGGTCAAG CTTGGCCGCG AAGGCGGCGG GCGCACCGAT
TTCTACGGTC CAAAGCCTGG CCTGGAAGGC AATGATTTCC GCAAGAGTTC CTACGCCAAG
GCCTTTGAGC CCTGGGGTGT GGTCGTCGTG ACAGGTCTTT ACATGGACGA TCTCGATGCG
GAAGTGAATG CGGCCATCTT CAAGGCCATT TCCATGGGCC TGATCGTTTT CGTCATCGGT
CTTGCCGCCG CTTATGTGGT GATCCGTGGC ATTTCGCGGC CGCTGACGGC CATTCACGAT
GCGCTGCGGG CCGTGGCCGA TGAAAATGTC ACGCTGACCA TTCCCCACAC CAATATGAGC
AATGAAGTCG GCATGATGGC CAAGGCCACC AAATCCTTGC AGGAAAAGGT GCGGGAACGC
CATGCCATGG TAGCCCGCCA GGAAGAACAG CAGCGCGAAC TGGACAGCGA GCGCCAGCAA
AATGCCGACC GGCAGGCTGA AGAAGCCCGC GCCCAGGCGC ATGTGGTCGC CACCATCGGC
GCCTCGCTGG AAAAGCTGGC AACCGGCGAT CTGACCGTGC GCTGCGCCGA TCTCGGCGCC
AAATACGAGG ATCTGCGCCA TAATTTCAAC GATGCCCTGA CCCGGCTGGA GCAGGCCATG
GCCCGCGTCA ACCTGAAGGG CAACGATATC AGCGTCAGCA AGGAAGAAAT CCGCCGCGCC
TCCGGCGAGC TTGCGACCCG CACCGAGCGC CAGGCCGCCA ATCTGGAGGA AACCTCGGCA
GCGCTGGACG AATTGACCGT GGCGATCCGC CAGACCGCCG ATGGCGCCCG CGAAGCGGCA
AGCCGGGTGA AATCGGTCAG CCAGGAAGCC CAGCAGAGCG ACGGCATTGT CGGCCACGCC
ATCGAGGCGA TGAGTGGCAT CGAAAAATCC TCCGAGGAAA TCACCAAGAT CATCGGGGTG
ATCGACGAAA TCGCCTTCCA GACCAACCTT CTCGCCCTGA ATGCCGGTGT GGAAGCCGCG
CGTGCCGGTG AAAGCGGCAA GGGGTTTGCG GTCGTCGCCC AGGAAGTGCG CGAACTGGCA
CAACGCTCGG CGGCAGCAGC CAAGGAAATC AAGGCGCAGA TCGCTCGCTC GTCGGCCCAG
GTCAATGAAG GCGTGCAGCT GGTGGGACGC ACCGGCGAAG CCCTGAAGCG GATCTCCACC
CAGATCACCG AGGCCAACGA GGTGGTGGCG CGGATTGCCG CCAGTGCCCA GGAACAGGAT
ACCACGCTCC GCTCGATCTC TTCCGCGCTC AACGTGCTCG ACACCACCAC CCAGCAGAAT
GCCGCAATGG CCGAGGAAAC CACCGCCTCA GCCGAGGTTC TCGCCAACGA CACCGGCGAC
CTTCTCAACC TGATCCAGGG TTTTCGCGTC AACCAGCAGG GTGATGGCGC GGCTCTTGGC
GGCATGGCCC AGCAGATGCG CCGGGCTGGC TGA
 
Protein sequence
MKNLRISLQL FLLVGGLMAA FAIATFFQIR SSEQTIYTQR YEMLRTEVET AISVMKLYNA 
KEVAGTLSRA DAQKQAYETI NALKFDPDGY FFGYDYDVNM LFHPDPKRVG QNFKGKADSK
GFAYRDELVK LGREGGGRTD FYGPKPGLEG NDFRKSSYAK AFEPWGVVVV TGLYMDDLDA
EVNAAIFKAI SMGLIVFVIG LAAAYVVIRG ISRPLTAIHD ALRAVADENV TLTIPHTNMS
NEVGMMAKAT KSLQEKVRER HAMVARQEEQ QRELDSERQQ NADRQAEEAR AQAHVVATIG
ASLEKLATGD LTVRCADLGA KYEDLRHNFN DALTRLEQAM ARVNLKGNDI SVSKEEIRRA
SGELATRTER QAANLEETSA ALDELTVAIR QTADGAREAA SRVKSVSQEA QQSDGIVGHA
IEAMSGIEKS SEEITKIIGV IDEIAFQTNL LALNAGVEAA RAGESGKGFA VVAQEVRELA
QRSAAAAKEI KAQIARSSAQ VNEGVQLVGR TGEALKRIST QITEANEVVA RIAASAQEQD
TTLRSISSAL NVLDTTTQQN AAMAEETTAS AEVLANDTGD LLNLIQGFRV NQQGDGAALG
GMAQQMRRAG