Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0958 |
Symbol | mcpA |
ID | 7387742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 804871 |
End bp | 806703 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643650470 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_002548678 |
Protein GI | 222147721 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein [COG4564] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATC TCAGGATTTC GCTGCAACTG TTCCTGTTGG TTGGCGGATT GATGGCGGCT TTCGCAATCG CGACATTCTT CCAGATCCGC TCCTCAGAGC AAACCATCTA TACCCAACGC TATGAAATGC TGCGCACCGA GGTGGAAACC GCCATTTCGG TGATGAAGCT TTACAATGCC AAGGAAGTGG CGGGCACCCT GTCGCGGGCC GATGCGCAAA AGCAGGCCTA TGAGACGATC AATGCGCTGA AATTCGACCC GGACGGCTAT TTCTTCGGCT ACGACTATGA TGTGAACATG CTGTTTCATC CCGATCCGAA ACGGGTCGGG CAGAACTTTA AAGGCAAAGC CGACAGCAAG GGCTTTGCCT ATCGCGACGA ACTGGTCAAG CTTGGCCGCG AAGGCGGCGG GCGCACCGAT TTCTACGGTC CAAAGCCTGG CCTGGAAGGC AATGATTTCC GCAAGAGTTC CTACGCCAAG GCCTTTGAGC CCTGGGGTGT GGTCGTCGTG ACAGGTCTTT ACATGGACGA TCTCGATGCG GAAGTGAATG CGGCCATCTT CAAGGCCATT TCCATGGGCC TGATCGTTTT CGTCATCGGT CTTGCCGCCG CTTATGTGGT GATCCGTGGC ATTTCGCGGC CGCTGACGGC CATTCACGAT GCGCTGCGGG CCGTGGCCGA TGAAAATGTC ACGCTGACCA TTCCCCACAC CAATATGAGC AATGAAGTCG GCATGATGGC CAAGGCCACC AAATCCTTGC AGGAAAAGGT GCGGGAACGC CATGCCATGG TAGCCCGCCA GGAAGAACAG CAGCGCGAAC TGGACAGCGA GCGCCAGCAA AATGCCGACC GGCAGGCTGA AGAAGCCCGC GCCCAGGCGC ATGTGGTCGC CACCATCGGC GCCTCGCTGG AAAAGCTGGC AACCGGCGAT CTGACCGTGC GCTGCGCCGA TCTCGGCGCC AAATACGAGG ATCTGCGCCA TAATTTCAAC GATGCCCTGA CCCGGCTGGA GCAGGCCATG GCCCGCGTCA ACCTGAAGGG CAACGATATC AGCGTCAGCA AGGAAGAAAT CCGCCGCGCC TCCGGCGAGC TTGCGACCCG CACCGAGCGC CAGGCCGCCA ATCTGGAGGA AACCTCGGCA GCGCTGGACG AATTGACCGT GGCGATCCGC CAGACCGCCG ATGGCGCCCG CGAAGCGGCA AGCCGGGTGA AATCGGTCAG CCAGGAAGCC CAGCAGAGCG ACGGCATTGT CGGCCACGCC ATCGAGGCGA TGAGTGGCAT CGAAAAATCC TCCGAGGAAA TCACCAAGAT CATCGGGGTG ATCGACGAAA TCGCCTTCCA GACCAACCTT CTCGCCCTGA ATGCCGGTGT GGAAGCCGCG CGTGCCGGTG AAAGCGGCAA GGGGTTTGCG GTCGTCGCCC AGGAAGTGCG CGAACTGGCA CAACGCTCGG CGGCAGCAGC CAAGGAAATC AAGGCGCAGA TCGCTCGCTC GTCGGCCCAG GTCAATGAAG GCGTGCAGCT GGTGGGACGC ACCGGCGAAG CCCTGAAGCG GATCTCCACC CAGATCACCG AGGCCAACGA GGTGGTGGCG CGGATTGCCG CCAGTGCCCA GGAACAGGAT ACCACGCTCC GCTCGATCTC TTCCGCGCTC AACGTGCTCG ACACCACCAC CCAGCAGAAT GCCGCAATGG CCGAGGAAAC CACCGCCTCA GCCGAGGTTC TCGCCAACGA CACCGGCGAC CTTCTCAACC TGATCCAGGG TTTTCGCGTC AACCAGCAGG GTGATGGCGC GGCTCTTGGC GGCATGGCCC AGCAGATGCG CCGGGCTGGC TGA
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Protein sequence | MKNLRISLQL FLLVGGLMAA FAIATFFQIR SSEQTIYTQR YEMLRTEVET AISVMKLYNA KEVAGTLSRA DAQKQAYETI NALKFDPDGY FFGYDYDVNM LFHPDPKRVG QNFKGKADSK GFAYRDELVK LGREGGGRTD FYGPKPGLEG NDFRKSSYAK AFEPWGVVVV TGLYMDDLDA EVNAAIFKAI SMGLIVFVIG LAAAYVVIRG ISRPLTAIHD ALRAVADENV TLTIPHTNMS NEVGMMAKAT KSLQEKVRER HAMVARQEEQ QRELDSERQQ NADRQAEEAR AQAHVVATIG ASLEKLATGD LTVRCADLGA KYEDLRHNFN DALTRLEQAM ARVNLKGNDI SVSKEEIRRA SGELATRTER QAANLEETSA ALDELTVAIR QTADGAREAA SRVKSVSQEA QQSDGIVGHA IEAMSGIEKS SEEITKIIGV IDEIAFQTNL LALNAGVEAA RAGESGKGFA VVAQEVRELA QRSAAAAKEI KAQIARSSAQ VNEGVQLVGR TGEALKRIST QITEANEVVA RIAASAQEQD TTLRSISSAL NVLDTTTQQN AAMAEETTAS AEVLANDTGD LLNLIQGFRV NQQGDGAALG GMAQQMRRAG
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