Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0916 |
Symbol | |
ID | 7387715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 774518 |
End bp | 775399 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643650443 |
Product | calcium-binding protein regucalcin |
Protein accession | YP_002548651 |
Protein GI | 222147694 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.722719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAACAG CGTATTCCGG CACCGTCCTG GTCGATACCC GCCTGCATCT GGGTGAAGGC CCGACCTATG ACGTCGCGCG TGACACCGCC TGGTGGTTCG ACATTCTCGG CAAGGGGCTG ATCGAGCATC GGTTTGCCAC GGGCGAGACG ATCCGCCACG ATCTGCCGAT GATGGCCAGC GCGTTGGCGA CGATCGATGC TGAACGCCAG ATGCTGGCGA CGGAACAGGG TATTTTCATC CGCGCCATTG CCAGCGGCGA ACTGACTTTG CTGACTGCGC TGGAACCGGA ACGGCCCGGC AATCGCTCCA ATGACGGGCG GGTCCATCCT TGCGGTGCAC TGTGGATAGG CACGATGGGC AAGACGGCAG CCGATGGGGC TGGTGCGATC TATCATGTGG CGGGCGACAA GGTGACTCGT CTTTATGATA GCATCAGCAT TCCCAACGCC ATCTGTTTTT CGCCGGATGG AAGCCTCGGT TACTATGTCG ACACGCGGGT CAATACGCTG ATGAAGGTCA GTCTCGATCC GGCAACCGGC CTTCCGACCG GGACGCCATC CGTCCATATC GACGGACGCG GCAAGGATGG TGGCATCGAC GGTGCGGTCT GCGATGCCGA GGGCGGCTTG TGGAATGCCC GTTGGGGCGT TGGCGCCGTC GATCACTACG ATAGAACAGG ACAGCACCTG GCGCGCTACC GGCTTCCCGC TGCCCAAACC ACCTGCCCGG CCTTTATCGG TGCCAAGGCC GACCGCCTGT TGGTCACCTC CGCCACCGAA GGGCTCGACG CCGATGGCCT GGCCGCCGAT CCCCATGGTG GCAAGACCTT CGTCCTCGAT ATCGCGGTCA AGGGCAGACA CGAGCCAAGC TTCCGCTTGT AA
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Protein sequence | MQTAYSGTVL VDTRLHLGEG PTYDVARDTA WWFDILGKGL IEHRFATGET IRHDLPMMAS ALATIDAERQ MLATEQGIFI RAIASGELTL LTALEPERPG NRSNDGRVHP CGALWIGTMG KTAADGAGAI YHVAGDKVTR LYDSISIPNA ICFSPDGSLG YYVDTRVNTL MKVSLDPATG LPTGTPSVHI DGRGKDGGID GAVCDAEGGL WNARWGVGAV DHYDRTGQHL ARYRLPAAQT TCPAFIGAKA DRLLVTSATE GLDADGLAAD PHGGKTFVLD IAVKGRHEPS FRL
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