| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0899 |
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| Symbol | kdtA |
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| ID | 7387703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 760320 |
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| End bp | 761639 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650431 |
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| Product | 3-deoxy-D-manno-octulosonic-acid transferase |
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| Protein accession | YP_002548639 |
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| Protein GI | 222147682 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.617372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAT TGGCACGCAT CGCACTGACC GCCTATCGCT GGGCAGGGAT CGTCGCCTTT
CCGTGTGCAG GGCTTTTCCT GTCCATTCGC GCCGCCAAAG GCAAGGAAGA TCGCACCCGG
CGGCTGGAAC GGGTCGGCTA TGCCGCCGCT AACCGACCGC GCGGGCCGCT GGTCTGGGTT
CATGCCGCCA GCGTCGGCGA GATGATGGCG GTAACGGCCC TGATGCGGGA ACTGCGTCGC
TGCGAGATCA ATGTTCTGCT GACCACTGGC ACGATCACCT CGGCCCAGAT TGCCAGCGAC
CGTCTTCAGG ACGGCGTCAT CCACCAATAT GTGCCAATCG ATGCCCTGCC CGCCGTGCGA
CGGTTTCTCG ATTATTGGCA GCCGGACATG ATGATCGGCG TGGAATCGGA GATCTGGCCG
ACCATGCTTC AAGATCTGCA TGACCGGCAG ATCCCGCAGA TCCTGGTCAA TGCCCGAATT
TCCGACCGCT CCTTTGCCCG CTGGCAGCGC CATCCCGCTG TGGCGGCCTC GCTGTTTTCC
AAGCTTGCCA TGGTCGTGGC GCAATCAGAT GTCGATGCCG AACGGTTCCG CGATCTCGGC
GCCTGGCCGG TCAGCGTCTC CGGCAATATC AAGGTGGACA CGGACGCCCC CCCCTGCGAC
AGCAGCCTCC TGACCAGCTA TGAGCGGCAG ATTGGTCATC GCAAGACCTG GGCGGCCATT
TCCACTGCCG AGGGCGAGGA AAAGATCGCT GCCATGGTCC ACCGCGCTTT GAAAGCCCAT
ATGGGCCAGC TCAGCATCGT TGTGCCCCGC CATCCCGAAC GGGCCGATGC CATTGAGGCA
ATGATGATCG AACAGGGGCT GACGGTTGCC CGCCGCAGCC GCAACGATGC GATCACGCCG
CAGACCGATG TGTTTCTGGG TGATACGATC GGCGAAATGG GGCTTTATCT GCGGCTGACG
GATATCGCCT TTGTCGGTCG CTCGATGATG AAGGAAGGCG GCGGCGGTAA CCCGATGGAG
CCTGCCGTGC TGGGCTGCGC AGTGCTGAGT GGCCCACATG TGGAAAATTT CCGCGAAAGC
TACCAGCGCC TGGTGCGCCA CGGCGCCGCC CGCGTGGTGC GCGACGCCGA AACCCTGGCG
AAAGCCGTAC ATTTCCTGAT GAATAACCAT CTGGCGCGTC ACAAAATGTC CGATTCCGGC
ATGGAAGCCG TGCAGGACAT GCGCGGCGCG CTGACGGCGA CCATCAAGGC GATGGAACCC
TATATCAATC CCTTGACCGT CAAGGCACGC CTCGAACCGA AGACGGCAGC GGGCGAATGA
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| Protein sequence | MSALARIALT AYRWAGIVAF PCAGLFLSIR AAKGKEDRTR RLERVGYAAA NRPRGPLVWV
HAASVGEMMA VTALMRELRR CEINVLLTTG TITSAQIASD RLQDGVIHQY VPIDALPAVR
RFLDYWQPDM MIGVESEIWP TMLQDLHDRQ IPQILVNARI SDRSFARWQR HPAVAASLFS
KLAMVVAQSD VDAERFRDLG AWPVSVSGNI KVDTDAPPCD SSLLTSYERQ IGHRKTWAAI
STAEGEEKIA AMVHRALKAH MGQLSIVVPR HPERADAIEA MMIEQGLTVA RRSRNDAITP
QTDVFLGDTI GEMGLYLRLT DIAFVGRSMM KEGGGGNPME PAVLGCAVLS GPHVENFRES
YQRLVRHGAA RVVRDAETLA KAVHFLMNNH LARHKMSDSG MEAVQDMRGA LTATIKAMEP
YINPLTVKAR LEPKTAAGE
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