Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0895 |
Symbol | mutL |
ID | 7387699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 756317 |
End bp | 758170 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643650427 |
Product | DNA mismatch repair protein |
Protein accession | YP_002548635 |
Protein GI | 222147678 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.380086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATCA AACAGCTTTC GGAAACCTTG ATCAACCAGA TCGCCGCTGG CGAAGTGATT GAGCGCCCGG CCAGTGCCGC CAAGGAATTG ATCGAAAACG CTATCGATGC CGGGGCAAGC CGCATCGAGA TCGCCACGGC GGGTGGCGGC AAGGCCCTGC TGCGCATCAC CGACAATGGG TGCGGCATGG ATGGGCAGGA CCTGGCGCTG GCGGTTCGCC GTCATTGCAC CTCCAAGCTC AATGAGTCGT TGATGGACAT CAAGAGCCTT GGCTTTCGCG GTGAGGCGCT GCCCTCGATC GGCTCGGTGG CGCGCCTGAC CATTGCCAGC CGCAGAGCAG ACAGTGCCAG CGCTTTCCAG ATCGCGGTGG AAGGCGGCAA GGTTGGAGAG GTGCGCCCGG CACCTGGAAA TCCTGGCACG GTGGTCGAGG TGCGCGATCT GTTTTTTGCC ACGCCAGCCC GGCTGAAATT CCTGAAAACC GAAAGAGCCG AGGCCGCCGC GATTACCGAA ATGGTCAAGC GCATGGCCAT CGCCTTTCCG AAGATCCGCT TCGTGCTGTC CGGCTCTGAC CGCTCGACCC TTGAACTGCC AGCGACCGGC GACGATCATC TCGCCCGAAT TGCCCAGGTG CTCGGCCCCG ATTTTCGGGA CAATGCCATT GCGCTCGACG CTGAGCGCGA GGATGTGCAT CTGGGCGGCT TTGCCGGTGT GCCGACCTTC AACCGTGGCA ATTCCGCCCA TCAATATGCC TTCGTCAATG GCCGTCCGGT GCAGGACAAG CTGATCCTGT CGGCCATTCG CGGCGCCTAT GCCGAAACCG TGCCGCATGG CCGCTATCCG GTGGCGGTGC TGGCGCTGAC GGTCGATCCG GCTCTGGTCG ATGTCAATGT CCATCCGGCC AAATCGGATG TGCGGTTTCG CGATCCCGGC CTGGTGCGCG GCCTGATCGT CGGGGCGATC CGCCAGTCCT TGACGCGCGA AGGCGACCGG TCATCGACGG CGGGGGCCGG TGCCATGCTG CGGGCCTTCC GCCCTGGTGC AAATGGCGGT TTTTCCGAAG GCGCGCAGGC GGCTGCGAAC AATTCTTATG CGCCCGCCTA TGGCGCACGG CCGCCGCAGC CTTCAGCATG GAGCGTCGAT ACGTCCCCCC ATCGGCCACT TGATGATGGT CAGAACCGGT TCGATGGTCT GGCGCTGCCG GCGGCTCGGG CGGATGCGCA TGTCTCGCCC TCGCAGATCT CCGAGCCTGT GGCGATGGCG ATGGAAAGCG GTAGGTTTCG CCTCGGCGCG GCGCGGGCGC AGGTTCACGC CAATTATATC GTCGCCCAGA CGCAGGACGG ACTGGTGATC GTCGATCAGC ATGCCGCCCA TGAGCGTCTG GTGTTTGAGG ATATGCGCAA GGCGCTATCG GGTCGCAGAT TGCCCAGCCA GGGCCTGCTC ATTCCCGAAA TCATCGGATT GCCGGAAGAA GACTGCGACC GTCTGATGGA TCACGCCGAA AACCTTGACC GGCTGGGCCT TGCCATCGAG CGGTTCGGGC CGGGAGCGAT TGCGGTGCGC GAAACGCCTG CCATGCTGGG CGAAGTGGAT GTGCCGGGAC TTGTGCGGCA ATTGGCTGAT GAAATTGCCG AATGGGAAAC GGCGGGCAGC CTGTTTGCCC GGCTGGAACA TGTGGCCGCC ACCATGGCCT GCCACGGATC GGTGCGCTCT GGCCGCCTGC TGCGGGTCGA GGAAATGAAT GCATTGCTGC GAAAAATGGA GGAAACGCCG GGTTCCGGCC AATGCAATCA CGGGCGTCCA ACCTATATTG AACTGAAACT GTCGGATATC GAGCGGCTGT TCGGTCGCAG TTGA
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Protein sequence | MSIKQLSETL INQIAAGEVI ERPASAAKEL IENAIDAGAS RIEIATAGGG KALLRITDNG CGMDGQDLAL AVRRHCTSKL NESLMDIKSL GFRGEALPSI GSVARLTIAS RRADSASAFQ IAVEGGKVGE VRPAPGNPGT VVEVRDLFFA TPARLKFLKT ERAEAAAITE MVKRMAIAFP KIRFVLSGSD RSTLELPATG DDHLARIAQV LGPDFRDNAI ALDAEREDVH LGGFAGVPTF NRGNSAHQYA FVNGRPVQDK LILSAIRGAY AETVPHGRYP VAVLALTVDP ALVDVNVHPA KSDVRFRDPG LVRGLIVGAI RQSLTREGDR SSTAGAGAML RAFRPGANGG FSEGAQAAAN NSYAPAYGAR PPQPSAWSVD TSPHRPLDDG QNRFDGLALP AARADAHVSP SQISEPVAMA MESGRFRLGA ARAQVHANYI VAQTQDGLVI VDQHAAHERL VFEDMRKALS GRRLPSQGLL IPEIIGLPEE DCDRLMDHAE NLDRLGLAIE RFGPGAIAVR ETPAMLGEVD VPGLVRQLAD EIAEWETAGS LFARLEHVAA TMACHGSVRS GRLLRVEEMN ALLRKMEETP GSGQCNHGRP TYIELKLSDI ERLFGRS
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