| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0872 |
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| Symbol | |
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| ID | 7387686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 740384 |
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| End bp | 741976 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650413 |
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| Product | Phage terminase-like protein |
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| Protein accession | YP_002548622 |
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| Protein GI | 222147665 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4626] Phage terminase-like protein, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0866597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCAT GGATTTTTGA CGATAGCCCG ATTGACGATC CGTTCGGTTA TGGCGAGCGG
GCGGTGAAAT TCCTGCGGCT TTTGAAGCAT CCAAAATCGA CAATGCCTGG AAAGGCGTTC
CAGCTTGATC CATGGCAGGA ACGTATTGTG CGTCGGATCT ACGGCCCGCG TCATCCTAAT
GGTCGCCGGA TCGTGCGCAC GGTCGCCATG CTGCTGCCAC GCGGCAACCG CAAAACCTCG
CTGGGCGCGG CACTGGCTCT TCTCCATACC ATCGGCCCGG AAAATCTGCC CGGTGGCGAA
TGCATGGTTG CGGCCTCGGA TAGATCGCAG GCCCGGATTG CCTATCAGGA AGCCTATAAC
ATCATCGGGG CGGAACCTCG GATGGATGGT CGGCTTCACC TGACGGACTC GAAGAACCGC
ATCCGCAATC CCAAGACCGG CGCATTCTTT GAAGCCATCA GCGCCGACGC CAGAACGGCC
CATGGTCATA CACCTGTCTT CGCCCTGGTG GACGAATTGC ACGCCTGGCC GAAACGCGAC
CTGTGGGAGG CCATCCGCTC CGGGCTTGTG AAGGTTGCCG GTTCGCTGCT GATGGTAATC
AGCACGGCGG GCCGTGGCCA AGAGAATGTT GCATGGGAGT TTTATGACTA TGCCCGCAAA
GTCCAGCGCG GCGAGATCAT TGATGAAAGC TGGCTGCCGA TCTTGTTTGA AACGCCCCGC
GATGCGGACT GGCAGGATGA AACCGTCTGG TACGCTTCCA ATCCGGGCTT GGCCTTTGGG
TATCCCGACA TAGCGGGCAT GCGCCAACTG GCGCGAGAAT CCGCCGAAAT CCCGGCAGAG
CGGGAAGCGT TCAAGCAGCT CAACCTCAAT ATCTGGCTTG ATCATTCCCT CGATCCGTTC
GTGGATATGA TGGTCTACGA TGAAGGTGCC TATCCCGTTG ACCTTGATGA CCTTGAGGGC
AAGCCCTGCT GGCTTGGCGT TGACCTGTCA TCCAACAATG ACCTGACAGC GGTTGTCGCT
TGCTGGGGCG ACAGCGAAAG CGGCTATGCC GTCCACCCCT GGTTCTTCTG CCCTGCGGAT
AACCTTCGCG CCCGCACGGA TCGCGACAAG GTGCCTTATG TGGCATGGGC GGAAGAGGAA
CATATCATTC CGACACCCGG CAATGTGGTG GATTACCGTT CGGTTGAGGA TCATATCCGC
GAATTGTGCG CCCGCTTTGA TGTGCGCGAA ATCGCCTTCG ATCCGCACAT GGCCCGCAAC
ATCATGAACA ACCTGCTGGA CGATGGCCTG CCAGCCGTGG AAATGCGGCA AGGCTGGGTG
ACGATGGCTC CGGCTGTGAA AGAGTTGGAA CGGGCCATTC TTGGCCGTCG CTTCCGCCAT
GGCGGCCACC CCGTCTTGCG GTGGAATTTC GATAACATCT CGGTTCACAC CGACACGGCG
GGCAATCGTT CGTTTCACAA GGGCAAGAGC AAAGACCGGA TCGACGGCGC TGTGGCGGCT
GCCATGGCCG TGGCCCGGTG TGCGGCCGGT GACAGCAACG TTTCCAGCTA CGACCATTTC
GAAGGCAATC TTGAAGAGTG GAGCTACGCA TAA
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| Protein sequence | MTSWIFDDSP IDDPFGYGER AVKFLRLLKH PKSTMPGKAF QLDPWQERIV RRIYGPRHPN
GRRIVRTVAM LLPRGNRKTS LGAALALLHT IGPENLPGGE CMVAASDRSQ ARIAYQEAYN
IIGAEPRMDG RLHLTDSKNR IRNPKTGAFF EAISADARTA HGHTPVFALV DELHAWPKRD
LWEAIRSGLV KVAGSLLMVI STAGRGQENV AWEFYDYARK VQRGEIIDES WLPILFETPR
DADWQDETVW YASNPGLAFG YPDIAGMRQL ARESAEIPAE REAFKQLNLN IWLDHSLDPF
VDMMVYDEGA YPVDLDDLEG KPCWLGVDLS SNNDLTAVVA CWGDSESGYA VHPWFFCPAD
NLRARTDRDK VPYVAWAEEE HIIPTPGNVV DYRSVEDHIR ELCARFDVRE IAFDPHMARN
IMNNLLDDGL PAVEMRQGWV TMAPAVKELE RAILGRRFRH GGHPVLRWNF DNISVHTDTA
GNRSFHKGKS KDRIDGAVAA AMAVARCAAG DSNVSSYDHF EGNLEEWSYA
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