| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0812 |
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| Symbol | tetA |
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| ID | 7386300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 697369 |
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| End bp | 698562 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650371 |
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| Product | tetracycline resistance protein |
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| Protein accession | YP_002548581 |
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| Protein GI | 222147624 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAG CTCTCGTCGT CATTTTCGCC ACCGTCGCTC TCGATGCGGT TGGGTTTGGC
CTCATCTTTC CCATTTTGCC GGCTTTGTTG CGGGAGGTGA CGCATATCCA GAATGTGGCG
CCCTATATTG GAATGTTGGT GGCGCTTCAT GCTGTCATTC AGTTTATCTT TGCGCCGATC
CTGGGATCGC TCAGTGATCG GCTCGGTCGC CGGCCGATCC TGTTGATTTC GCTGGCGGGG
GCGGCGGTCA ATTATCTGTT TCTTGCTTTT GCTGACAATC TCTGGCTGCT GCTGCTAGGG
CGCGCCATTA CCGGGTTGAC CAGCGCCAAT ATGTCGGTGG CGACGGCCTA TGTGACGGAT
ATTTCGCGGG AAGATCAGCG GGCGCGGCGC TTTGGGCTGT TTAATGCGAT GTTTGGTCTG
GGCTTCATCT TCGGGCCGAT TATCGGCGGC GCGCTGGGGG ATTATTGGTT GCGGCTGCCC
TTCATTGCCG CTGCCGTGCT GAATGGCGGC AATCTGCTGC TGGCGTTTTT CGTCCTGCCG
GAATCCCGCA TTCCGACGCG GGAGAAGATC GATCTGGTGG CCATCAATCC GCTGCGGCCT
TTGAAATGGG CGTTGTCGCT GAAAAATCTG CTGCCGATGG TCATCCTGTT TTTCATCTTC
AGCTTGACGG GTGAGGCCTA TGCCACCTGC TGGGCGCTGT GGGGTGGCGA TGCGTTTCAG
TGGAACGGGC TGTGGATCGG CCTGTCGCTC GGCGCGTTCG GCATCTGTCA GGCGCTTGCC
CAGACCTTTC TTCCTGGCCC GGCGGTCAAG CTGTTCGGCG AACGGATCGC CATTCTGATC
GGCGTTTCCA GCGCCTGCTT TTCGTTGACC GTCATTGCCT TTGCAACCGA AAGCTGGATG
GTGTTTGCGA TCATGCCGGT TTTTTCCCTG AGCGGCATTG GCGTTCCGGC CCTGCAATCG
CTCGCAACCG CCCAGGTCGA TGCGGATAAG CAAGGCCAAT TCCAGGGCGT GCTGGCTTCC
GCCCTCAGCC TTGCCGCCAT TATCGGCCCC CTGATGTTTT CAAGCGTCTA CTTTCTCATC
CGGGACTATT GGCCGGGCGG CATCTGGATG GCGGTCATTG CCGTTTATGC CGTGAGCGTA
CCCTTGGTTC TGGGCCTGCG TCTCAAGACT AAAACCAGCG GGAAAGCAGT TTAG
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| Protein sequence | MNKALVVIFA TVALDAVGFG LIFPILPALL REVTHIQNVA PYIGMLVALH AVIQFIFAPI
LGSLSDRLGR RPILLISLAG AAVNYLFLAF ADNLWLLLLG RAITGLTSAN MSVATAYVTD
ISREDQRARR FGLFNAMFGL GFIFGPIIGG ALGDYWLRLP FIAAAVLNGG NLLLAFFVLP
ESRIPTREKI DLVAINPLRP LKWALSLKNL LPMVILFFIF SLTGEAYATC WALWGGDAFQ
WNGLWIGLSL GAFGICQALA QTFLPGPAVK LFGERIAILI GVSSACFSLT VIAFATESWM
VFAIMPVFSL SGIGVPALQS LATAQVDADK QGQFQGVLAS ALSLAAIIGP LMFSSVYFLI
RDYWPGGIWM AVIAVYAVSV PLVLGLRLKT KTSGKAV
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