Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0772 |
Symbol | flhA |
ID | 7386272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 658864 |
End bp | 660954 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643650343 |
Product | flagellar biosynthesis protein FlhA |
Protein accession | YP_002548553 |
Protein GI | 222147596 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCAAG CACCGACGAC CTCACTTCCG ACAATTGCCA ATAATCGCGG CCGAGAAATC GGCTTTGCCA TGGGCATTGT CGCTATTCTC TGCATTCTCT TTCTGCCGAT CCCACCCTTC CTGATCGATA TGGGGCTGGC GTTTTCCATT GCCCTTTCCG TTCTGATCCT GATGGTATCG CTCTGGATAC AACGGCCGCT GGATTTCTCC TCTTTCCCGA CCATTCTGCT GATTTCGACC ATGGTGCGCT TGTCGCTGAA TATCGCGACG ACACGGGTTA TCCTGTCGCA TGGTCATCAG GGTCACGATG CGGCCGGCAG TGTCATTGCC GGCTTTGCCA ACCTGGTTAT GTCCGGCGAT TTCGTGATCG GTCTGATCGT GTTTGCGATC CTGGTCACCG TCAACTTCAT CGTCATCACC AAGGGTGCCA CCCGTATCGC GGAAGTGGGC GCCCGCTTCA CGCTGGATGC CATTCCCGGC AAGCAGATGG CGATCGATGC CGATCTCTCG GCGGGGATTA TCGAGGAAAG CGAAGCTCAA CGCCGGCGCA AGGAACTGGA GCAGGAAAGC TCCTTTTTCG GCGCGATGGA CGGTGCCTCG AAATTCGTGC GCGGCGATGC GGTCGCTGGT CTGATCATCA CCGCCATCAA TATCGTCGGT GGCATTATCA TCGGTTACTT CCGCCATGGC ATGCCGATCA GCGAAGCAGC CGATGTGTTC GTCAAGCTCT CGGTGGGCGA TGGCCTGGTC TCGCAGATCC CCGCTCTGAT CGTCTCGCTC GCCGCCGGCC TGCTCGTCAC CCGTGGCGGC AATGCCGGGT CCACGGACGA AGCGGTCATC AACCAGCTGA GCGGCTATCC GCGTGCGTTG TCGGTCGCTT CTGGCCTGAT GTTCCTTCTG GCGATCATTC CGGGCCTGCC CTTGCTGCCC TTCGTGATCC TGGGTGGTCT CATGGCGTTC GGCAGCTGGT ACATTCCCCG CCAGGTGGAA GCCGTGAACC TTGCCAAGCG CCAGGTCGAG GAAAAGAAGG TTATTCAGAA CAAGGAAGCC GAAAAGGATT CGGTCAAGAG CGTGCTGAAA ACCTCCGAGA TCGAGCTGGC GCTCGGCAAG CTGGTTTCGA CCCGCCTGCT TGGCTCGCAT CAGGAACTGG CTTTCCGCGT CGGCAAGATG CGCAAGAAAT TCGCCAGCCA ATATGGTTTT GTCGTGCCTG AAATCAAGGT GACGGACGAT ATCGCCATCC CGGACAAGTC CTATCATATT CGGGTCCATG GCACGACCAT CGCCTCGAAC CTGTTGCGGG TTGGCGAAGT GCTTGTTGTC ACCGGCAATG GCCGCAAGCC GCGCATTCCC GGTGACGAAA TTCGCGAACC CGCATTCGGC ATGCCAGCCG TCTCGATCAT GGAAGCCTTT ACCGAAGACT TGAAGCGCGA AGGCTTTCAT CCGATCGACA ATGTCTCTGT CGTGCTAACC CATTTGAGCG AGGTGATCCG CAACAATCTG CCTCAGCTCT TGTCCTATAA GGACGTGAAA ATCCTGATCG ATCGGCTCGA TCCTGAATAT AAGAAGCTGG CAGACGAAAT CTGCTCCTCG CATATGTCCT ATTCAGGTTT GCAAGCCGTG TTGAAACTGT TGTTGGCCGA ACGGGTGTCG ATCCGTAACC TGCATCTGAT CCTCGAGGCC GTGGCCGAAC TGGCGCCGCA TGTGCGCAAG ACCGAGCAGA TCGTTGAACA TGTGCGTGTG CGCATGGCTC AGCAATTGTG CGGCGATCTG ACCGACAATG GCGTGCTGCG GGTTCTGCGA TTGGGCAGCA AATGGGATCT GGTCTTCCAT CAGGCCCTGA AGCGCGACAA CAAGGGTGAG GTTGTCGAAT TCGATATCGA CCCGCGTTCG CTGGAAGAGT TCAGCGAGCA GGCAAGCCGG GTTATCCGTG AATTCATGGA CCGCGGCCTG CCTTTCGTGC TTGTCACGTC GCCGGAAACG CGGTCTTATG TGCGCATGAT TATTGAACGC TTGTTTGCAA CCCTGCCGGT GCTGTCACAT GTCGAATTGG CCAAAGGCAT CGAAATCAAG ATCCTGGGAT CGATTTCATG A
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Protein sequence | MAQAPTTSLP TIANNRGREI GFAMGIVAIL CILFLPIPPF LIDMGLAFSI ALSVLILMVS LWIQRPLDFS SFPTILLIST MVRLSLNIAT TRVILSHGHQ GHDAAGSVIA GFANLVMSGD FVIGLIVFAI LVTVNFIVIT KGATRIAEVG ARFTLDAIPG KQMAIDADLS AGIIEESEAQ RRRKELEQES SFFGAMDGAS KFVRGDAVAG LIITAINIVG GIIIGYFRHG MPISEAADVF VKLSVGDGLV SQIPALIVSL AAGLLVTRGG NAGSTDEAVI NQLSGYPRAL SVASGLMFLL AIIPGLPLLP FVILGGLMAF GSWYIPRQVE AVNLAKRQVE EKKVIQNKEA EKDSVKSVLK TSEIELALGK LVSTRLLGSH QELAFRVGKM RKKFASQYGF VVPEIKVTDD IAIPDKSYHI RVHGTTIASN LLRVGEVLVV TGNGRKPRIP GDEIREPAFG MPAVSIMEAF TEDLKREGFH PIDNVSVVLT HLSEVIRNNL PQLLSYKDVK ILIDRLDPEY KKLADEICSS HMSYSGLQAV LKLLLAERVS IRNLHLILEA VAELAPHVRK TEQIVEHVRV RMAQQLCGDL TDNGVLRVLR LGSKWDLVFH QALKRDNKGE VVEFDIDPRS LEEFSEQASR VIREFMDRGL PFVLVTSPET RSYVRMIIER LFATLPVLSH VELAKGIEIK ILGSIS
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