| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0756 |
|---|
| Symbol | motB |
|---|
| ID | 7386260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 646943 |
|---|
| End bp | 648277 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643650331 |
|---|
| Product | flagellar motor protein MotB |
|---|
| Protein accession | YP_002548541 |
|---|
| Protein GI | 222147584 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1360] Flagellar motor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACG CTGAAAATCA CCACCACGGC AAGAACGAGA TCATCGTTAT CAAGCGGCAT
GGCGGCGGCG ATCACGATGG CGCCCATGGC GGCGCCTGGA AGATTGCCTA TGCCGACTTC
ATGACCGCGA TGATGGCCTT CTTCCTGGTC ATGTGGCTGG TCAATGCTGC CAATGAGAAG
ACGACCGCTT CAGTTGCCAG CTATTTCAAT CCGATCAAGC TGGCCGATGA AAAGCCGACC
GAGAAGGGCG TGAAAAAGCC GGTCGATCAG GCTGAAGGCG AGGAAAGCAA GGAACGCTCG
AAAATCAAAG CCGAAGAGGA AACGCTCGGC AAGGCGGCGG CAACCGGCGA GGACATGACC
TCGACCTCGG GTGATAAGCC TGTCTATTCG GAAGCGGACC TGTTCGAAAA TCCCTATTCC
GTCTTGGCCG AAATTGCCCA GGAAGTTGGC CAACAGGCCA ATGTCAGCGC CAAGGGTGAA
GGCGGAGCCA GCGAATCTGG CCCATCCACC GGCGCGTCGG GCGGCGAGGC TTACCGCGAC
CCGTTCGATC CGGATTTCTG GAGCCAGCAG ATGCAGACGG CGCAGGGCAA GCCCGGCAAA
GCAAAGCCTG ACGAGCAGCA AACCGTGGCC GAGGCGGCGG CAAAGCCCGA TCCATTCGCG
CAAAAACCGG TCGATCAGCA GGCTTCTGCG GCGGCGGCCG CAGCCGCACC GGATGGAGCG
CAGGGCACTC CCCCATCGAA GTCTCAGCCT GAGGCAAAGC CGCAGGTCGA AATCGACGGT
CAGCAGGTAG CCATCGCCGT TCCCAAGGCG CGGCCTGATC CCAAGCAGGT TGCCCGTGAA
GAGCAGAATG CATCGGCTGA TAGCGATCAG ACACAGCAGG CGGACCAGCT TAAGCAGCAG
ATCGCCTCTG AAATCGGCGG TGTCGCGGGT AAATTGGCCG AGGGGTTGAT TGTGCAGCCG
GCTGAAGGTG GACTGCTGAT AACACTGACC GACCAATCCC AGGCTCCGAT GTTCGATGTC
GGCTCCGCCG TGCCTCGCAA GGAAATGGTT TTGGCGATGG AAAAGATCGG CAAGTTGCTG
GCGGAGCGCC AGGGTGCCGT GGTTATCAGG GGCCACACCG ACGCACGCCA ATATAAAGGC
CCTGATAACG ACAACTGGGG CCTGTCGATG TCACGCGCCC ATTCGGCCTA TTACATGCTG
GTGCGCGGCG GGCTCGCACA AAACCGGATC ACCCAGGTGT CCGGCTTTGC CGATCGCCGG
CTGTTGAAGC CGGAGGACCC GCTGGCCGCT GCAAACCGAC GGATCGAGAT CCTTGTTCAG
GGAGACCAGA AGTAA
|
|---|
| Protein sequence | MSDAENHHHG KNEIIVIKRH GGGDHDGAHG GAWKIAYADF MTAMMAFFLV MWLVNAANEK
TTASVASYFN PIKLADEKPT EKGVKKPVDQ AEGEESKERS KIKAEEETLG KAAATGEDMT
STSGDKPVYS EADLFENPYS VLAEIAQEVG QQANVSAKGE GGASESGPST GASGGEAYRD
PFDPDFWSQQ MQTAQGKPGK AKPDEQQTVA EAAAKPDPFA QKPVDQQASA AAAAAAPDGA
QGTPPSKSQP EAKPQVEIDG QQVAIAVPKA RPDPKQVARE EQNASADSDQ TQQADQLKQQ
IASEIGGVAG KLAEGLIVQP AEGGLLITLT DQSQAPMFDV GSAVPRKEMV LAMEKIGKLL
AERQGAVVIR GHTDARQYKG PDNDNWGLSM SRAHSAYYML VRGGLAQNRI TQVSGFADRR
LLKPEDPLAA ANRRIEILVQ GDQK
|
|---|
| |