| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0716 |
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| Symbol | |
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| ID | 7388740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 617987 |
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| End bp | 619612 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650302 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002548512 |
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| Protein GI | 222147555 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGTA TTGAAAATAT CTCCAAGCAG AACAGCCATC GCCTGTTGTT CATCGAGGCC
TCCGCCGCCC TGAACAAGGG GGAGAAGATC GGCCTGGTCG GGCCAAATGG CGCTGGAAAG
ACCACGCTGT TTCGGATGAT CACCGGCGAG GAATTGCCGG ACGAAGGCCA GGTCGCGACC
GAAAAAGGTG TGACCATCGG CTATTTCAAC CAGGATGTCG GCGAAATGTC CGGGCGTTCG
GCGGTCGCCG AGGTCATGGA CGGGGCAGGG CCGGTCAGCA CGGTGGCGGC AGAATTGCGC
GAGCTGGAAG GTGCCATGTC GGACCCCGAC CGGATGGATG AGATGGATGC GATCATCGAG
CGCTATGGCG AGGTGCAGGC GCGCTATGAA GAGCTGGATG GATACGCTCT GGAAGGCCGC
GCGCGCGAGG TGCTGGATGG GCTGAGCTTT TCCCAGGAGA TGATGGATGG CGACGTCGGC
AAGCTGTCGG GTGGCTGGAA GATGCGCGTG GCACTGGCGC GTATTCTATT GATGCGGCCC
GATGTGATGC TGCTTGACGA ACCGAGCAAC CATCTCGACC TCGAAAGCCT GATCTGGCTG
GAAAGCTTCC TGAAGAATTA TGATGGTGCC TTGTTGATGA CCTCGCATGA CCGCGAGTTC
ATGAACCGGA TCGTCACCAA GATCATCGAG ATCGATGGCG GTTCGCTGAC CAGCTATTCC
GGTGACTATG GCTTTTACGA GGGCCAGCGC GCCCAGAACG AGAAGCAGCA GCAGGCGCAA
TTCGAGCGTC AGCAGGCAAT GCTGGCCAAG GAAATCAAGT TCATCGAGCG GTTCAAGGCG
CGTGCCTCCC ATGCGGCCCA GGTGCAGAGC CGGGTGAAGA AACTCGACAA GATCGACCGG
GTCGAGCCGC CGCGCCGCCG CCAGACGGTG GCGTTCGACT TCCTGCCCGC GCCGCGCTCC
GGCGATGACG TCATCAATAT CAAGAATGTC CATAAGGCCT ATGGCAGCCG GACGATTTAT
CAGGGGCTGG ATTTCATGGT CCGCCGGCGC GAACGCTGGT GCATCATGGG TATCAATGGC
GCTGGAAAAT CGACGCTGCT GAAGCTGGTT GCTGGCACGA CCGAGCCGGA TCAAGGCACG
GTCAGCATCG GCGCCAGCGT CAAGCTCGGC TATTTCGCCC AGCATGCCAT GGATGTGCTG
GATGGCGACA GCACTGTGCT GCAATGGCTG GAGGAAAGCT TTCCGAAGGC AGGGCAGGCC
CCGCTCCGGG CATTGGCCGG TTGCTTCGGC TTTTCCGGCG ACGATGTCGA AAAGCGCTGC
CGGGTGCTGT CAGGCGGCGA GAAAGCGCGG TTGGTGATGG CGGCCATGCT GTTCGACCCA
CCAAATCTGC TGGTTCTGGA CGAGCCGACC AACCATCTGG ATCTCGACAC CAAGGAAATG
TTGATCAAGG CGCTGTCGGC CTATGAAGGC ACCATGCTGT TCGTCAGCCA TGACCGGCAT
TTTCTGGCCG CCTTGTCTAA CCGCGTCCTG GAACTGACGC CGGATGGCAT CCATCAATAT
GGCGGCGGTT ATACCGAATA TGTGGAGCGC ACCGGCCAGG AAGCGCCCGG CCTGCATGCA
GCATAA
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| Protein sequence | MIRIENISKQ NSHRLLFIEA SAALNKGEKI GLVGPNGAGK TTLFRMITGE ELPDEGQVAT
EKGVTIGYFN QDVGEMSGRS AVAEVMDGAG PVSTVAAELR ELEGAMSDPD RMDEMDAIIE
RYGEVQARYE ELDGYALEGR AREVLDGLSF SQEMMDGDVG KLSGGWKMRV ALARILLMRP
DVMLLDEPSN HLDLESLIWL ESFLKNYDGA LLMTSHDREF MNRIVTKIIE IDGGSLTSYS
GDYGFYEGQR AQNEKQQQAQ FERQQAMLAK EIKFIERFKA RASHAAQVQS RVKKLDKIDR
VEPPRRRQTV AFDFLPAPRS GDDVINIKNV HKAYGSRTIY QGLDFMVRRR ERWCIMGING
AGKSTLLKLV AGTTEPDQGT VSIGASVKLG YFAQHAMDVL DGDSTVLQWL EESFPKAGQA
PLRALAGCFG FSGDDVEKRC RVLSGGEKAR LVMAAMLFDP PNLLVLDEPT NHLDLDTKEM
LIKALSAYEG TMLFVSHDRH FLAALSNRVL ELTPDGIHQY GGGYTEYVER TGQEAPGLHA
A
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