Gene Avi_0652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0652 
Symbol 
ID7388696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp567360 
End bp567950 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content57% 
IMG OID643650261 
ProductTranscriptional regulator protein 
Protein accessionYP_002548471 
Protein GI222147514 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTATA GCACCGAGCA CAAAGAGCAG ACGCGAGCAA AGGTCGTTCT TGCCGCCGGA 
CAGGCATTTC GAAAAGAAGG CTATGGCGGA GCTGGTATCG ATGCGTTGAC GAAAGCGGCA 
GGCGTTACTA ACGGCGCATT CTACGGCCAC TTCAAATCCA AAGGAGAAGC TTTCCGTGCC 
GCGGTTGTTG CTGGAATGGA AGAACTCCGT CAGGGAATTG CAGCATTGAA ACTGGAACAA 
CCGCGTAGCT GGCTCAAAGC CTTCGCTGGC TACTATCTCG GATACAAGCG CACTTGCGAA 
CTTGGAGAGA GTTGCGCCTT GCCAACCCTC TCCCCCGATG TCATGCGAGC GGATGACGAG 
ACGCGGCGTT GCTACACTGA AGAACTGTGG CGATTGGTGA CTGAAATCGC CTCCGGCTTG 
GAGGATGACG GCTCGCAGTA CTCAACGGAA GACCGAGCAT TGCTGTTGCT TGCACTATTC 
GCCGGTGGTG CGACCCTGGG GCGCGCAGTA TCCGACGAGG CTCTATCCGA AAGAATAGCC 
CGACTTGTGA CCGCTGAGGC GCTGCGCAAT GGATCGCCTT CGCAGAATTA G
 
Protein sequence
MRYSTEHKEQ TRAKVVLAAG QAFRKEGYGG AGIDALTKAA GVTNGAFYGH FKSKGEAFRA 
AVVAGMEELR QGIAALKLEQ PRSWLKAFAG YYLGYKRTCE LGESCALPTL SPDVMRADDE 
TRRCYTEELW RLVTEIASGL EDDGSQYSTE DRALLLLALF AGGATLGRAV SDEALSERIA 
RLVTAEALRN GSPSQN