Gene Avi_0647 details

Gene Information

• Locus tag: Avi_0647
• ID: 7387997
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 559710
• End bp: 560363
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643650256
• Product: hypothetical protein
• Protein accession: YP_002548466
• Protein GI: 222147509

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.962938
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGACGC ACCCGGCAAG CCAGCAGGCA ATCCGTCCCA ACGTCCTTAG CTGTATGCAG 
CGTCTGGTTG GCCGCAAATG GCAACGGTCC CCGGATCGTG CTGCGTCGGT GGCTCGAAAG 
CGCAAGTTGG GCGGATCAAG CGGGATGCCT GACACCATCC GGCATCACTA CACAGAAGGC 
GAACGCGCCG TGCTGACAGT CATTGCAGGC GAGGTGAAGC ACCACGGCCT TTGTGATCTG 
GCGCTTGATC GTATCGCCGC TGTTGCTGGC GTGAGCCGTA CCACCGTGCA GAACGCTATT 
CGGGAAGCCC GCGCCCTTGG CCACCTCTCC GTGGAAGGCA GGCCGCGCAA GGGGCAGAAG 
AGCCTCACCA ACCTTGTGCG GATTGTCTCA GCTGAATGGA TGAACTGGCT CAAGCTAGGG 
CCTTCGCTGG CCAGACAGAT AGGGTTCAAA GATTTCCACC CCACGAAGAC CCAAGATAAA 
ATCGGTAGCC TTAGCCAAGG CAAGAGCCTA CCGAAAAACG CATACCGCGA CCACTGCCTG 
GGTTTGGGAG AAAGCAACCC TATTGCTGGC AGCAACGAAC TGAGAGGGCG CGGTTGGACG 
TGTCGAGATC GACGACATCA GCGTCGAGCG GACCACCCGG CAGATTGCCC TTAA 

 

Protein sequence

MPTHPASQQA IRPNVLSCMQ RLVGRKWQRS PDRAASVARK RKLGGSSGMP DTIRHHYTEG 
ERAVLTVIAG EVKHHGLCDL ALDRIAAVAG VSRTTVQNAI REARALGHLS VEGRPRKGQK 
SLTNLVRIVS AEWMNWLKLG PSLARQIGFK DFHPTKTQDK IGSLSQGKSL PKNAYRDHCL 
GLGESNPIAG SNELRGRGWT CRDRRHQRRA DHPADCP