Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0631 |
Symbol | |
ID | 7388680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 548070 |
End bp | 549410 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643650242 |
Product | glycosyltransferase protein |
Protein accession | YP_002548454 |
Protein GI | 222147497 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACA AGCCAACCCT TTCGATTTGC GTGCCTTCGC GCAACCGGCA AATCTATTTC CAAAAGACCA TTGCGGGACT GTTGCGCAAC ACGCGTACCG ATGTCGAGTT CATTTTTACC GACAATTCCG ACGATCCCAC CGTGATGAAC GATTTCATGG CGAACCTCGC GACGGATAAG CGTATTGTCT ATCTTCCTAC AACCGATCGT GTCCTGTCGA TGATGGACAA TTGGGAGCGG ACGATTCATG CCAGCCGAGG CGAGTGGGTG GTGTTCATCG GCGACGACGA TTTCATCGAG CCTGACGTCG CCGGACTGAT CCTGCGGATT GTCGAGATTA ATCCGGCTAT GGAGGCATTA ACCTGGGGGA TTTTGAATTA TTCCTGGCCG GTTGAAGGAG AAGCGGTCTG TACCGTGGTT GTGCCGTTTG ATCGAAGCGT CATGCGTGTA CCCAGGGCGG AACCGATGCG CCGGATGTTT GGCTGGCACG AGTCGACATC CGTTCCAACG TCGGGCTTTT CCATTTACCA TTCCGCTATC AGGCGAAGGC TGCTGGATCG GATCTATGCC AAATATCATC ACCGTTACTT TGAGCATCCC GTTGTTGACT ACGATATTGC GATGAAAGTG ATCTGCGAAG CGCAGGACTT CGTGGTGTGC CAACGGCCAT TCTCAATGCT CGGAGCCTGC CCCCAGAGCA ATTCTTTTTC CATCGGTCGC TTGGAAGACA CCAAGATGCG GGCCAAAATT TTCATGGACG AATTCGGCAA GAATTTTGAA GAAGACCCGA CGCTGCGGGA TTTCCCATTC AGCTCCTTTC TGGGCTGTAC GGCGACCATT GGCGTCACCC AGCAATGGTT CCGGAAGACT TATAATGTCA ACTATACGGG GTGGGAAAAG GGCTATGCAA TCGCCTGCGC ACTCAATACC GAAACCTATC GAGACAGGGA GGCCTTTGAC ATCATTCGCG CAGGTTACGA GACGGCCTTC CGCAATTGGC AGGGGGGAAG GTTTCTGTCA CATTACCAAC CGGTGTGGCG CGGCGACATA CCCGTGACGC CCATGAGCGG TGCGACCTCT GCCGGGGTGA TGGTGCTTGC CGATATCGCT GGGGCAACGT CCCCTGCCGA GCTTTGGGAT GTCGTTTCGG CGATGATTGT GGCTCCCGAC GATATTCTCG TCCGTCCGAC AGGCTTGCGT CTGCAGAGCG AAGAGGAGTT TGCCACGAAT GAACTTATGC GGCTCGAAGG AAATATGCGT GTTGGCAGTT CTGAAAAGGC AGTTCCCGGC AAGCCGGTCG CCATGCGCAA TGACCGACAT ACCAGAGGCC GGCGGCGCTG A
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Protein sequence | MTDKPTLSIC VPSRNRQIYF QKTIAGLLRN TRTDVEFIFT DNSDDPTVMN DFMANLATDK RIVYLPTTDR VLSMMDNWER TIHASRGEWV VFIGDDDFIE PDVAGLILRI VEINPAMEAL TWGILNYSWP VEGEAVCTVV VPFDRSVMRV PRAEPMRRMF GWHESTSVPT SGFSIYHSAI RRRLLDRIYA KYHHRYFEHP VVDYDIAMKV ICEAQDFVVC QRPFSMLGAC PQSNSFSIGR LEDTKMRAKI FMDEFGKNFE EDPTLRDFPF SSFLGCTATI GVTQQWFRKT YNVNYTGWEK GYAIACALNT ETYRDREAFD IIRAGYETAF RNWQGGRFLS HYQPVWRGDI PVTPMSGATS AGVMVLADIA GATSPAELWD VVSAMIVAPD DILVRPTGLR LQSEEEFATN ELMRLEGNMR VGSSEKAVPG KPVAMRNDRH TRGRRR
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