Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0592 |
Symbol | |
ID | 7388985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 507109 |
End bp | 507753 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643650213 |
Product | hypothetical protein |
Protein accession | YP_002548425 |
Protein GI | 222147468 |
COG category | [S] Function unknown |
COG ID | [COG1284] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGATGG CATTGATGAG CAATCTGTTC GGCATCTGGA ACGATAATCC CACCCGTCAC AACCGGGCCG AGGATATCCA GGGCATTATC TGCGGAACAA TGATTTCGGC GCTCGGCCTC TATCTGATTG CCAAGATTGG TCTCGTCACC AGCGGCATCG CGGGTCTTGC CTTCGTCATC CATTACTGGA CGGGCTGGAG CTTCGGTCTG GTGTTCTTCC TGCTCAACAT GCCTTTCTAC ATTCTCTCCA TCAAACGGGT CGGCTGGGAC TTTACCCTCA AAACCTTCGT GGCCGTGGCG CTGACCTCGT TTCTCGTCGA AATCGAAAGC CGTTTCATCG TCATCGAGAG CATCAACCCA GTCTGGGGCG CTATCCTCGC GGGTCTCCTG CTCGGCTTCG GCCTGCTGGC TCTCTACCGC CACCGCGCCA GCCTCGGCGG CATCGGCATC CTCGCGGTCT TCGTCCAGGA CCGTTTCGGC ATCCAGGCGG GATTGGTGCA ATTGGCCTTT GATGTCGTGG TCATGGCCCT CGCATTTACC GTGGTCAGCC CGTGGGTGGT TGGCTGCTCG ATTATCGGGG CAGTGGTGCT GAATGTGTTC GTGCTGATCA ACCATCGGTC GGATCGGTAT ATTGCGTTGC GGTGA
|
Protein sequence | MVMALMSNLF GIWNDNPTRH NRAEDIQGII CGTMISALGL YLIAKIGLVT SGIAGLAFVI HYWTGWSFGL VFFLLNMPFY ILSIKRVGWD FTLKTFVAVA LTSFLVEIES RFIVIESINP VWGAILAGLL LGFGLLALYR HRASLGGIGI LAVFVQDRFG IQAGLVQLAF DVVVMALAFT VVSPWVVGCS IIGAVVLNVF VLINHRSDRY IALR
|
| |