| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0511 |
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| Symbol | |
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| ID | 7388921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 432418 |
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| End bp | 433413 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643650151 |
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| Product | C4-dicarboxylate-binding protein |
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| Protein accession | YP_002548364 |
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| Protein GI | 222147407 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.545606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCACTC TCAACAAAAG CAGCCGGCTG CCGGCCATCA TGCTCGGCAC CGTACTTGGT
CTTTCCAGCC TTTGGTCCAG CACCGCCAGT GCGGAAACAA CATTGCGGCT GGCGCATGCT
TCGGCGCCTG AAAGCCTGAT CAACGAAGCA GTTCAAAAAT TCGCAACAGA AGTTGGGGAG
AATACCAAGG GTTCGGTCAA GGTTCAGATC TTCCCGAATG CCCAGCTTGG TGACGAAGGC
CCAATCGCCG ATGGCGTCGG TGCGGGTTCG ATCGATATCG GTCTTGGCGG TGCGGTCGAT
GCCATCGATC CGCGCCTCAA CGTGCTGTCG CTGCCGTTCC TGTTCAAGGA CGCATCAAAC
GTTCACGCAT TTCTCGATGG CGAACAAGGC CAGAAGATCC AACGCCTCGG CGAGGAACGC
GGCTATGTGA TGCTCGGCGT GCTCGACTCC GGCTTTCGCC AGTTTGCGAC CAATAAACCT
ATCGAAAAGC CTGCGGATCT GGCTGGCGTA AAAATTCGCA CGCCTCCCAA TCCGGTCATT
CTCGCCACCA TGAAGCAGCT TGGCGCCTTG GCGGAATCCA TTCCTTTCGG TCAGGTCTAT
ACAGCGCTGC AATCGCATGT CGTTGCAGCC GTCGAGCCTG AAATGCGCGA TTACTGGGAC
TCCAAATGGT ATGAAGTCGC CAAGGACCTG TCGATCTCCA ATTACATCTG GACCGCCAAC
TGGTGGTACA TGAACAAGGA CAAGCTGGAT TCGCTGACAC CTGACGAACA GGCCGCCGTG
AAGAAGGCCG CGACAGACAC CGTCGTCTGG TATCGTAGCG CCTTGGACAA GGCCTATGCC
GACACCCAGA AGAAGCTCGA GGGCAAGGGT GTGAAGGTGA CGAAAGTCGA TACCGCACCG
TTTGTCGCTC TGGTCTCGCC GGTCTACGAG CAGTTCTCGA AAGAATGGGG CAGTGATCTC
GTGTCGGCAG TGAAACAAGC CGCCAGCGCG AACTGA
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| Protein sequence | MFTLNKSSRL PAIMLGTVLG LSSLWSSTAS AETTLRLAHA SAPESLINEA VQKFATEVGE
NTKGSVKVQI FPNAQLGDEG PIADGVGAGS IDIGLGGAVD AIDPRLNVLS LPFLFKDASN
VHAFLDGEQG QKIQRLGEER GYVMLGVLDS GFRQFATNKP IEKPADLAGV KIRTPPNPVI
LATMKQLGAL AESIPFGQVY TALQSHVVAA VEPEMRDYWD SKWYEVAKDL SISNYIWTAN
WWYMNKDKLD SLTPDEQAAV KKAATDTVVW YRSALDKAYA DTQKKLEGKG VKVTKVDTAP
FVALVSPVYE QFSKEWGSDL VSAVKQAASA N
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