Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0485 |
Symbol | phoB |
ID | 7388485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 410350 |
End bp | 411033 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643650130 |
Product | phosphate regulon transcriptional regulatory protein PhoB |
Protein accession | YP_002548344 |
Protein GI | 222147387 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.537934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCCGA AAATTGCCGT CGTTGAAGAC GAAGAAGCCC TGAGCGTCCT TTTGCGTTAT AATCTGGAAT CGGAAGGCTA TGAGGTCGAA ACCATTCTGC GGGGAGACGA AGCCGAGCTT CGCCTGCAGG AGCGGGTGCC GGATCTGCTG ATCCTCGATT GGATGTTGCC GGGTGTTTCC GGCATTGAGC TATGTCGTCG CCTGCGGATG CGGCCCGATA CCGAGCGCCT GCCGATCATC ATGCTGACCG CGCGTGGCGA AGAGAGCGAA CGGGTGCGCG GACTTGCCAC CGGTGCCGAC GATTATGTCG TCAAACCGTT CTCGACGCCG GAACTGATGG CCCGCGTCAA GGCGATGCTG CGCCGCGCCA AGCCGGAAGT TCTGTCCAGC CTGCTGCGTT GCGGCGATAT CGAGCTTGAT CGCGAAACCC ATCGTGTCCA TCGCAAGAGC CGCGAAGTGC GCCTCGGGCC CACCGAATTC CGGCTGCTGG AGTTCCTGAT GACCTCACCC GGCCGGGTGT TTTCCCGCTC TCAACTGCTG GACGGCGTCT GGGGCCATGA CATTTATGTG GACGAGCGCA CAGTCGATGT CCATGTCGGA CGGCTGCGCA AGGCGCTCAA CTTTTCCAAT ATGCAGGACG TGATCCGCAC GGTGCGCGGC GCCGGCTATT CGATGGAAGC ATAA
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Protein sequence | MLPKIAVVED EEALSVLLRY NLESEGYEVE TILRGDEAEL RLQERVPDLL ILDWMLPGVS GIELCRRLRM RPDTERLPII MLTARGEESE RVRGLATGAD DYVVKPFSTP ELMARVKAML RRAKPEVLSS LLRCGDIELD RETHRVHRKS REVRLGPTEF RLLEFLMTSP GRVFSRSQLL DGVWGHDIYV DERTVDVHVG RLRKALNFSN MQDVIRTVRG AGYSMEA
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