| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0465 |
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| Symbol | rbsK |
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| ID | 7388471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 395746 |
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| End bp | 396645 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643650116 |
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| Product | ribokinase |
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| Protein accession | YP_002548330 |
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| Protein GI | 222147373 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACCG TTTTCGGCTC CATCAACATG GATCTCATCG CGACCACCAG CCGTCTGCCC
AAGCCAGGTG AGACAGTGGC CGGCAACGGC TTTGCCACGG CAGCCGGCGG CAAGGGCGCC
AATCAGGCGC TTGCTGCACG CCGCGCAGGC GCCCAGGTGC GGATGGCCGG TGCGGTCGGC
AAGGACGGGT TCGCCGCCCC TGCACTGGCG CTTCTGGAGG AAAGCGGAAC GGATCTAGAC
AGCGTCAAGA CCGTAGCGGA GGCAACCGGA ACCGCACTCA TTCTCGTCGG CGGTGACGGC
GAGAACATGA TTGCCGTCGT TCCAGGCGCC AATGGCAGCC TGACCAGCGC CGATGCCAGC
GCCGCCATCA AGACCATGAC TCGCAATGAC AGTCTGGTGC TGCAATTGGA AATTCCAGCC
GCAGCCGTCG AAACCGCCCT GCATGAAGCA AAGGCTGCCG GGATCCGCAG CATCCTCAAT
ATCGCCCCAC TAACCGAGGA GGCCGCGCGC CTCGGACGAA TGGCCGATAT CGTCATTGCC
AATGAAACCG AATTCGAGCG GCTGGCTGGT GAGACCAACA TGGGGGCTGC GGAACGCGAA
GCCGCGCTTG TCCGCCTACA TGGCGAAACC GGCCAAATCC TAATCGTGAC GCTGGGCGCC
GAAGGCGTCA TCGCCATACG CGACGGTAAG ATTGAGCGTG CATCCGGCTT GACCATCGAG
CCGGTCGATA CTGTCGGTGC CGGGGACACC TTCTGCGGTT ATCTGGCCGC TGGTCTCGAC
GCGGGCTTTG CCTTCGAGGA GGCGCTGCAC CGCGCTGCCG TCGCCGGGTC CCTGGCCTGC
CTGAAAGCTG GTGCGCAACC CGCTATTCCG CTAGCAGAAG CCGTCACGGA AAGACTCTGA
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| Protein sequence | MITVFGSINM DLIATTSRLP KPGETVAGNG FATAAGGKGA NQALAARRAG AQVRMAGAVG
KDGFAAPALA LLEESGTDLD SVKTVAEATG TALILVGGDG ENMIAVVPGA NGSLTSADAS
AAIKTMTRND SLVLQLEIPA AAVETALHEA KAAGIRSILN IAPLTEEAAR LGRMADIVIA
NETEFERLAG ETNMGAAERE AALVRLHGET GQILIVTLGA EGVIAIRDGK IERASGLTIE
PVDTVGAGDT FCGYLAAGLD AGFAFEEALH RAAVAGSLAC LKAGAQPAIP LAEAVTERL
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