Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0456 |
Symbol | engB |
ID | 7388466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 391736 |
End bp | 392395 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643650111 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | YP_002548325 |
Protein GI | 222147368 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0574752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCAA CAAAGGCAAC GAGCGACCAG CCGCTGTTCG GCCGGCCATG GATTTTTATC CGAGGCGTGC CATCGATGAA ATTTCTGCCG CCGGAAGGCC CGCTGGAGAT TGCCTTTGCG GGGCGCTCCA ATGTGGGGAA ATCATCGCTG ATCAACGCCC TCGTCGGCCA GAAGGGTCTG GCGCGCACAT CCAATACGCC GGGCCGGACC CAGGAGCTGA ACTATTTCGT TCCCGAGGGC TATAGCGGCG AGGGCGACGA CCTGCCGCCG ATGGCGCTGG TCGATATGCC GGGCTATGGT TATGCCAAGG CGCCCAAAGA CCATGTGGAC GCGTGGACCA AGCTGGTCTT CGACTATCTG CGCGGAAGGG CGACGTTGAA GCGGGTTTAT CTGCTGATCG ACAGCCGCCA TGGTATCAAG GCCAATGATG AAGATGTGCT GACGCTGCTG GACAAGGCGG CGATGTCCTA CCAGATCGTG CTGACCAAGA CCGACAAGAT CAAGGAGGCG GGCGTGCCGC GTCTGATCGA GGAAACCCTC GAGAAAATCC GCAAGCGTCC GGCGGCCTAT CCCTTTGTGC TTTCGACGTC CTCGGAAAAG GACAAGGGAC TGAAAGAATT GCGTGCGGCG ATTTGCGAAA CCGTCGGGCA TTTCGGCTGA
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Protein sequence | MTATKATSDQ PLFGRPWIFI RGVPSMKFLP PEGPLEIAFA GRSNVGKSSL INALVGQKGL ARTSNTPGRT QELNYFVPEG YSGEGDDLPP MALVDMPGYG YAKAPKDHVD AWTKLVFDYL RGRATLKRVY LLIDSRHGIK ANDEDVLTLL DKAAMSYQIV LTKTDKIKEA GVPRLIEETL EKIRKRPAAY PFVLSTSSEK DKGLKELRAA ICETVGHFG
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