| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0449 |
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| Symbol | |
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| ID | 7388460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 382946 |
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| End bp | 383698 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643650104 |
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| Product | hydrolase |
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| Protein accession | YP_002548319 |
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| Protein GI | 222147362 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAC CGAAAACGTC ACCAGAGCCC GCCGATTTTA CCCATATCCG TGATTGGGTC
TTCGACCTCG ACAACACGCT TTATCCGCAT CACATCAATC TGTTTGCCCA GATTGATCGC
AACATGACCG CCTATGTTGC GGATCTGTTG CAGATGGAGC CGGATGACGC GCGCATCCTG
CAAAAGCGCT ACTATCATGA GCATGGTACG ACATTGGCAG GACTGATGGC CCATCATGGC
GTCGATCCGA ACGATTTCCT GGAAAAGGCC CATGCCATCG ATTATTCCGC CCTGTTGCCG
GATGTGGCTC TGGGCGAGGC GATCAAGGCT CTGCCGGGGC GAAAGTTTAT TTTCACCAAT
GGCACGGTGG AACATGCCGA GGCAGCGGCG AGGGCGCTCG GCATTCTCGA TCATTTCGAC
GACATTTTCG ATATCGTTGC TGCTGCCTAT CTGCCGAAAC CGGCCAGCCA GACCTATGAC
ATATTCACCC GGCTGAAGCA GATCGATGCC GGGCAGGCAG CGATGTTCGA GGATCTGCCG
CGCAATCTCG TCGTGCCGAA GGCCTTGGGC ATGAAAACCG TACTGCTCGT GCCGCGCAAT
CTGGAAGCCG TGGTGCTGGA AAGCTGGGAG CGGATGGATA GCGACGAAGG CCATGCGCAT
GTCGATTACG CCACCGACGA TCTGGCTGGC TTTCTTGCCT CTCTTTTGGC AGCTGGAGAG
TTTCAGGTTC AGAGTGAGCC AGACAGGTCA TAG
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| Protein sequence | MSTPKTSPEP ADFTHIRDWV FDLDNTLYPH HINLFAQIDR NMTAYVADLL QMEPDDARIL
QKRYYHEHGT TLAGLMAHHG VDPNDFLEKA HAIDYSALLP DVALGEAIKA LPGRKFIFTN
GTVEHAEAAA RALGILDHFD DIFDIVAAAY LPKPASQTYD IFTRLKQIDA GQAAMFEDLP
RNLVVPKALG MKTVLLVPRN LEAVVLESWE RMDSDEGHAH VDYATDDLAG FLASLLAAGE
FQVQSEPDRS
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