| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0447 |
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| Symbol | hspH |
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| ID | 7388458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 381279 |
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| End bp | 381707 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643650102 |
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| Product | small heat shock protein |
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| Protein accession | YP_002548317 |
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| Protein GI | 222147360 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGACGGA CAAAATCCAT CACCACACCC CTGCTGCTGG GTTTCGACAT TACCGATGCC
GTGTTGAGTC AGTTGGCCCG GACCAGCGAC GGCTATCCGC CCTATAATAT CGAGCTTGTT
CGCCGCACGA GCGACCATGA AGGGGACCGG TTGCGGATTA CCCTTGCCGT GGCGGGCTTT
TCCGAGAGCG ATCTGGAGGT TCTGGTCGAG GGAAACCAGC TGATCATTCG AGGCTCCCAG
ACGGAACGCC CGGATGCCGA TTATTTGTTT CGCGGCATAG CTGCACGGAA CTTTCAGCGC
AGTTTCCTGT TAACGGACGG AATGGACGTT TCGCGCGCAC GGATGCGAAA CGGCCTACTG
GTGGTCGAAC TAATTCGTCC TGATACGCAG CAAATGGTAA GGAAAATTAA TATTTCCGCC
TCAGACTAG
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| Protein sequence | MRRTKSITTP LLLGFDITDA VLSQLARTSD GYPPYNIELV RRTSDHEGDR LRITLAVAGF
SESDLEVLVE GNQLIIRGSQ TERPDADYLF RGIAARNFQR SFLLTDGMDV SRARMRNGLL
VVELIRPDTQ QMVRKINISA SD
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