| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0415 |
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| Symbol | lspA |
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| ID | 7388433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 353903 |
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| End bp | 354394 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643650077 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_002548292 |
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| Protein GI | 222147335 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGTT CCGCTGCCTT GTTTTGTCGC CCGGTTCCGG CCATCCTGTT CATCCTGTCG
CTGCTGATTT TGGACCAGGC GATCAAATAT GCGGTCGAGG TCAGCTTGCC CATGCATGAA
CTCGTGCCTG TTGTGCCGAT GCTTGGCCTG TTTCGCACCC ACAATCTCGG CGTAGCCTTT
TCCATGCTTT CGCATCTCGA TGCCTGGGTC ATCGTCGTCA TGCGGCTTGC CATCGTCGCT
TTTGTCGCCT GGCTCTGGCG CCAGACCAGC CGCGATCACC AGTTTGCACA TCTGGGCTAT
TGCCTGATCA TTGCCGGCGC TTTCGGTAAT ATCATCGACC GCTTCACCTA TGGCTATGTG
GTGGACTATA TCTTGTTTCA TACCGAGACA TGGTCGTTTG CGGTCTTCAA CCTGGCCGAT
AGCCTGATTA CAATAGGGGC GGGCTTCATC CTGCTGGAAG AACTGCTGGT TCTGCGCCGC
TCAAAAGGGT AG
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| Protein sequence | MTRSAALFCR PVPAILFILS LLILDQAIKY AVEVSLPMHE LVPVVPMLGL FRTHNLGVAF
SMLSHLDAWV IVVMRLAIVA FVAWLWRQTS RDHQFAHLGY CLIIAGAFGN IIDRFTYGYV
VDYILFHTET WSFAVFNLAD SLITIGAGFI LLEELLVLRR SKG
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