Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0406 |
Symbol | yhbN |
ID | 7388427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 348902 |
End bp | 349465 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643650071 |
Product | cell envelope biogenesis protein YhbN |
Protein accession | YP_002548286 |
Protein GI | 222147329 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCACA GCCACCGTCG CCTTTCCTTC CGCGTTGCTT GCGCCACGCT GACCGCAGGC CTTGTCGCGA CCGCAGCCGC AACCGGCGCG TTTGCCCAGT CCGCCACCAG CAACATGAAC AGCCTGAAAC TGTCCGGCGA CAAGCCGATC CAGATCGAAA GCGATGCATT GGAAGTGCAT CAGCAAGAGA ACAAAGCCAA TTTCAACGGC AATGTGAAGG TGGTTCAGGG CACCACCACG ATGCGGTCCG GCACGATGGT GGTGAAATAC AAGGGCCAGG GCGCGGCTGT GACCAGCGGC GACGCCAAGA TCGACACGAT CGATGTGGCC GATAACGTCA TTCTCAATAC CGAAACCCAG CAGGCCACGG CCGACAAGGG CCATTTCGAC ATGAACACCC AGATCTTTAC GCTGGATGGC GACAAGGTCG TGCTGTCGGA AGGCGGCAAT GTGTTCGTCG GCTGCAAGCT CACCGTCCAT ATGACGACGG GCGAAGCCAA GCTCGACAGT TGTGGCAAGC GCGTGCAAAT CCAGCTGGAT CCCAAGTCCA AGCAGAAACC CTGA
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Protein sequence | MTHSHRRLSF RVACATLTAG LVATAAATGA FAQSATSNMN SLKLSGDKPI QIESDALEVH QQENKANFNG NVKVVQGTTT MRSGTMVVKY KGQGAAVTSG DAKIDTIDVA DNVILNTETQ QATADKGHFD MNTQIFTLDG DKVVLSEGGN VFVGCKLTVH MTTGEAKLDS CGKRVQIQLD PKSKQKP
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