| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0384 |
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| Symbol | fsrR |
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| ID | 7387825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 328236 |
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| End bp | 329270 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650051 |
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| Product | two component sensor kinase |
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| Protein accession | YP_002548266 |
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| Protein GI | 222147309 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGTCC GAATTCTTTA TCTCGATGAC GACCCGGCCA TCGTGCGGCT GGTGCAGAAA
GCACTCGGGC GCAACGGACA TTCCGTCACC CATGCAGAAG ATCTGGAGCG GGCGCTGGGC
TTTCTGGCGT CTGAAAACTT CGACGTTATT GTTCTCGATC ATTATCTCAG CAATATGACC
GGTCACGATG TGCTGGCGCA TTTGCGTGGA CGGCATATCA TGACGCCGGT GGTCTATGTG
ACCGGCTCCA ACGAAGCCCG TATCGCCATC GACGCGATCA AGGCAGGCGC CTCCGATTAC
GTCATCAAGA CGACCAGCGA GGATTTCCTG TCGCTGCTGG AAAGCGCCAT CCGACAATCG
GTCGAAAATG CCCGGCTGCG CGAAGCCAAG GTCAAAGCGG ACGAGGAAAT CCGCCTTGCC
AAGGAAAGGG CGGAAGCGCT GCTCAGCGAG GTCAACCACC GCGTTGCCAA CAGTCTGGCA
TTGGTGGCAA GCCTACTGCG GCTTCAGATC GCCAATGCCC GCAGCGATGA GGTCAAGGCC
GAGCTGACAG AGACCCAGGC TCGCATTACC GCCATTGCCG GCATGCATCG CAGCCTCTAC
ACGTCAGACG ATGTCAGCCG GGTCGATATG GACATTTATA TCGCCAATCT GGTGCGGGAA
ATCGGCGGTT CGCTTGCCAA TCCCGACAAG CCGATCACCC TGACAGTCGA TGCCGAGCCG
ATTTCTCTCA CAGCTGACCG CGCCGTCTCC ATCGGCATGA TCGTCACCGA ACTGGTGACC
AATGCGATCA AATATGCCTA TCCCGACCGC AAGGACGGCG AAATCCGCGT GCGGCTGTGT
CATGCGCAGC CCGGCCATGC GCTGTTGACG GTGGAGGATG ACGGCATCGG CATCAGTCCT
GGCGCTGCCC CGAAGGGCAC GGGCCTCGGC AGCCGGATCA TCAAATCCAT GGCCGCAACG
CTGGGCGAAG GGCTCTTCTA CCAGGAGATC GCGGCGGGAA CGATTGCCTG CGTGCCGATA
GACCTAGCCC GATAG
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| Protein sequence | MNVRILYLDD DPAIVRLVQK ALGRNGHSVT HAEDLERALG FLASENFDVI VLDHYLSNMT
GHDVLAHLRG RHIMTPVVYV TGSNEARIAI DAIKAGASDY VIKTTSEDFL SLLESAIRQS
VENARLREAK VKADEEIRLA KERAEALLSE VNHRVANSLA LVASLLRLQI ANARSDEVKA
ELTETQARIT AIAGMHRSLY TSDDVSRVDM DIYIANLVRE IGGSLANPDK PITLTVDAEP
ISLTADRAVS IGMIVTELVT NAIKYAYPDR KDGEIRVRLC HAQPGHALLT VEDDGIGISP
GAAPKGTGLG SRIIKSMAAT LGEGLFYQEI AAGTIACVPI DLAR
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