| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0343 |
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| Symbol | |
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| ID | 7387792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 296504 |
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| End bp | 297481 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643650018 |
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| Product | NADH-ubiquinone oxidoreductase |
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| Protein accession | YP_002548233 |
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| Protein GI | 222147276 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00306764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTTCG CAAATCTTCC GCCGCTCGTT ACCGTTTTCG GAGGCTCCGG ATTCGTGGGC
AGGCATGTGG TGCGGGTGCT GGCCCAACGC GGTTACCGGG TGCGCGTCGC CGTGCGCCGC
CCCGATCTGG CGGGTTTCGT GCTGCCGTTC GGCAATGTCG GACAGATTTC GCTGTCCCAG
GCCAATCTGC GCTACCGCGA CAGCGTCGCA AAGGCCGTTG AAGGCGCGTC GGTTGTCGTC
AATTGCGTTG GCATCCTGCT GGAATCAGGC CGCAACAAGT TCGACGCCGT GCAGGATTTC
GGTGCCCGTG CCGTGGCTGA AGCAGCAACC GCTGCAGGTG CCAGGCTGGT GCATATCTCG
GCCATCGGCG CCGATGCGAA ATCCGCCTCC AGCTACGCAG CCAGCAAGGG CCGGGGCGAA
GATGCCATCC GCCAGGTCGC GCCGGGCGCG GTCATCCTTC GGCCATCCAT CGTTTTCGGC
CCTGAGGACA GCTTCTTCAA CAAATTTGCA GCAATGGCCC GCCTGTCGCC CGTCCTACCC
TTGATCGGCG GCGGCAAGAC GAAATTCCAG CCGGTCTTCG TCGAAGACGT GGCCGAAGCC
GTGGCCAAAG CGGTCGACGG CAAGGTGGCT GCCGGTCTCT TTGAGCTGGG CGGACCGGAA
GTTCTGACCT TCCGGCAATG TCTTGAGGAA ATGCTGCGGG TTATCGACCG CACTAATCCG
CTGGTGTCGC TGCCCTTTGG TATCGCTTCG CTGCTTGCCT CCGTCGCCTC GGCTATTCCG
CTGATCACAC CGCCGCTGAC CAACGATCAA CTGACGCTGC TGAAAAGTGA TAACGTGGTC
TCCGAAGCCG CCAAGAAGGA AGGCCGGACG CTCACAGCCC TTGGCATTAC GCCAACGGCC
GTTGCCGCCG TGCTGCCCTC CTATCTCATC CATTTCCGTC CGCATGGACA ATATAGCCGC
TCCGGCAAGG CAGCCTGA
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| Protein sequence | MTFANLPPLV TVFGGSGFVG RHVVRVLAQR GYRVRVAVRR PDLAGFVLPF GNVGQISLSQ
ANLRYRDSVA KAVEGASVVV NCVGILLESG RNKFDAVQDF GARAVAEAAT AAGARLVHIS
AIGADAKSAS SYAASKGRGE DAIRQVAPGA VILRPSIVFG PEDSFFNKFA AMARLSPVLP
LIGGGKTKFQ PVFVEDVAEA VAKAVDGKVA AGLFELGGPE VLTFRQCLEE MLRVIDRTNP
LVSLPFGIAS LLASVASAIP LITPPLTNDQ LTLLKSDNVV SEAAKKEGRT LTALGITPTA
VAAVLPSYLI HFRPHGQYSR SGKAA
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