Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0311 |
Symbol | recF |
ID | 7387766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 266366 |
End bp | 267490 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643649992 |
Product | recombination protein F |
Protein accession | YP_002548207 |
Protein GI | 222147250 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.406883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAA AAACCTTCAT CAACCGGCTG CAGCTGACAG ATTTCCGCAA TTACGGCTCC GCCTCCTTGC GGCTCGATGG CCGCCATGTG GTGCTGACCG GCAATAATGG TTCCGGCAAG ACCAATTTGA TGGAAGCGGT TTCCTTTCTG TCGCCGGGGC GCGGGCTGCG CCGTGCGGTG CTGTCCGATG TGGCGCGGGC CGGTGCGGCA AGCGGATTTT CGATTTTTGC CAGCCTGGAG GGCATGGCCG GAGACGTGGA GCTTGGCACC GGTTCGGAGG TTCTGGACGA GACGGCGGTG CGGCGTCTGC GCATCAATGG CGCCTCGGTG CGCTCCGTCG ATGAATTGAC CGATCATCTG CGCGTTCTCT GGCTGACGCC CGCCATGGAC GGTCTCTTCA CCGGCTCCTC TTCCGAGCGG CGCCGGTTTC TGGATCGGCT GGTCCTGTCG ATCGATCCAC AGCATGGCCG TCGCGCCAGC GACTTCGAGC GCGCCATGCG CAGCCGCAAC AAGCTGCTCT CTGAAGGTCG TTTCGATGCC AGTTGGCTTG CCGGGATAGA GCAGCAGATG GCGGCGCTCG GCATTGCCAT GGCGCTCGCC CGTCAGGAAA TGATGCGGTT GCTGGCCGCT CTTATCGAGC AGCGACGGGA GCCTGAAACT TTTCCGGGGG CAGACCTGAT GCTGTCGGGC TTCATGGATG AGCATGCTGG CACGGCGGCT ATCGATCTCG AAGACACCTA TCGCGACAGT CTGGCAGGCT CCAGGGGCAG GGATGCGGCG GCGGGCCGCA CGCTGGAGGG GCCGCATCGC AGCGATCTTC TGGTCCGTCA CCGGGAAAAG GACATGGAAG CCGAGCGCTG TTCGACCGGC GAGCAGAAGG CTCTGCTGAT CGGCCTGATC CTTGCCCATG CCGAACTGGT GGCGACGATG ACCGGTTTTG CGCCGATCCT GCTTTTGGAT GAAATTGCCG CCCATCTCGA CGAGGGCCGT CGCGCTGCCC TGTTCGACCG GATCGACGTG CTCGGCGGCC AGGCTTTCAT GACCGGTACC GATGCGCAGA TGTTTGCAAG TCTGGGCGAT CGGGCACAAT TCGTCACTGT GGATGACGGC CATCTGTCAT TGTGA
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Protein sequence | MAEKTFINRL QLTDFRNYGS ASLRLDGRHV VLTGNNGSGK TNLMEAVSFL SPGRGLRRAV LSDVARAGAA SGFSIFASLE GMAGDVELGT GSEVLDETAV RRLRINGASV RSVDELTDHL RVLWLTPAMD GLFTGSSSER RRFLDRLVLS IDPQHGRRAS DFERAMRSRN KLLSEGRFDA SWLAGIEQQM AALGIAMALA RQEMMRLLAA LIEQRREPET FPGADLMLSG FMDEHAGTAA IDLEDTYRDS LAGSRGRDAA AGRTLEGPHR SDLLVRHREK DMEAERCSTG EQKALLIGLI LAHAELVATM TGFAPILLLD EIAAHLDEGR RAALFDRIDV LGGQAFMTGT DAQMFASLGD RAQFVTVDDG HLSL
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