Gene Avi_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0293 
Symbol 
ID7387588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp249043 
End bp249738 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content54% 
IMG OID643649978 
Producthypothetical protein 
Protein accessionYP_002548193 
Protein GI222147236 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000191826 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTA ATGTGAGAAA AATCGTTATA AATTCAGCAT TTATAGGAAT GGCAACGGGC 
TTTGGCGGCC TGACCATTGG CGGCGTGTCA ACGGCTTCGG CGCAGGATGC CCAGACGGCC
CCACCCGCCG GGGTCTACAA GCTGGATCCG ACCCATGCGA ACCTGACATG GACGGTCAAG
CACAATACGA TTTCCAACTA CACCGCTCGC TTTGGCAAGC TGGAAGCCAC GCTTTCTCTC
GACCCAGCGA AAATCGAAGC CTCCAAGATC GAGGTGACGA TTGATCCGAC ATCGGTGGAT
GTGCCCTATC CCGCCGATTA TAAGGCCACC CACGCCAAAT CGCCTTATGC GACCTGGCCT
GAGGAAATCA GCAAGGATCC AAAAAAACTC AACAGTGACG CTTTCCCGAA GATCACCTTC
ACATCGACCA GCGTGAAGAA GACCGGTGAC AAGACGGCCG AAATCCTCGG CAATTTGACA
TTCCTGGGTG TCACCAAGCC GGTGACGCTG AATGCAACGC TGAACGGGTC CATTGACAGC
CATCCATTTG CAGGTGTTCC GGCCATTGGA TTTGCCGCGG AAGGGACGTT TGACAGAACG
GCGTTTGGCC AACCTGTCGG TTATGTCGGC AAGGATGTGA CGATCCGCTT TGACGGTGAG
TTCATCCAGG ACCCGGCAGC GTCTCCATCC AAGTGA
 
Protein sequence
MNFNVRKIVI NSAFIGMATG FGGLTIGGVS TASAQDAQTA PPAGVYKLDP THANLTWTVK 
HNTISNYTAR FGKLEATLSL DPAKIEASKI EVTIDPTSVD VPYPADYKAT HAKSPYATWP
EEISKDPKKL NSDAFPKITF TSTSVKKTGD KTAEILGNLT FLGVTKPVTL NATLNGSIDS
HPFAGVPAIG FAAEGTFDRT AFGQPVGYVG KDVTIRFDGE FIQDPAASPS K