Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0278 |
Symbol | phnC |
ID | 7387578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 238012 |
End bp | 238851 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643649968 |
Product | phosphonate ABC transporter ATP-binding protein |
Protein accession | YP_002548183 |
Protein GI | 222147226 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3638] ABC-type phosphate/phosphonate transport system, ATPase component |
TIGRFAM ID | [TIGR02315] phosphonate ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTCG AACTGACCGA GGTGACACGG CGTTTTGGCA AGAAGATTGC CGTGGAAGCC GTGACCCTGT CCATTCCGCA TGGGCAGATG GTCGGCATTA TCGGTCGGTC CGGTGCGGGG AAATCCACTT TGCTGCGAAT GATCAACCGC TTGGCCGATC CGACATCCGG GTCGATGCGG TTCGGCGATC AGGAGGTGAC GCGCCTCAAG GGATCGGCTT TGCGCAGCTG GCAGCGCGAT TGCGCGATGA TTTTCCAGCA GTTCAACCTG GTTCCGCGTC TGGATGTTCT GACCAATGTC ATGCTGGGGC GTCTCAATCA TCGCTCCACG GCGCTGAGCA TCCTCAATAT TTTTACGCGC GAAGAGCGGA TCATGGCGAT TGCCGCTTTG GAGCGGCTGG GCATCGAGCA GACGGCGCTG CAGCCGGCTG GCACACTGTC CGGTGGTCAG CAGCAGCGGG TGGCCATTGC CCGCGCGCTG ATGCAGGCGC CGAAAATGCT GCTGGCCGAC GAGCCGATTG CCTCGCTCGA CCCTTTGAAC GCCAAGATCG TCATGGATGC GCTGCGCGAC ATCAACGAGC GCGAAGGCAT CACCGTGATC ACCAATCTGC ACACGCTGGA TACGGCGCGG GCCTATTGCG AGCGGATCAT CGGCATGGCG GCGGGCAAGG TGGTGTTCGA TGGGCCGCCG GATGCGCTGA CAGCGCAGGC GGTGCAGGCG ATCTATGGCA CTGGCCAGGA TGGCAATGGC ATTGACGAGA GCATGACATC GACCGCGATC CGTTTGCCGA AGTCGGACTT GGCCCTGTCT GTGCCGATGG TGGCGGCCAC GGCAGGCTGA
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Protein sequence | MNFELTEVTR RFGKKIAVEA VTLSIPHGQM VGIIGRSGAG KSTLLRMINR LADPTSGSMR FGDQEVTRLK GSALRSWQRD CAMIFQQFNL VPRLDVLTNV MLGRLNHRST ALSILNIFTR EERIMAIAAL ERLGIEQTAL QPAGTLSGGQ QQRVAIARAL MQAPKMLLAD EPIASLDPLN AKIVMDALRD INEREGITVI TNLHTLDTAR AYCERIIGMA AGKVVFDGPP DALTAQAVQA IYGTGQDGNG IDESMTSTAI RLPKSDLALS VPMVAATAG
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