| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0264 |
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| Symbol | deoC |
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| ID | 7387568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 229522 |
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| End bp | 230310 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649958 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | YP_002548173 |
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| Protein GI | 222147216 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGGAGC AGATCTTGGA TAGCCGTGAA CTGCGCGAAT GCGCTGCCGT TGCCCTGTCG
GTGCTGGATC TGACCAATCT GAAAGACGAT TGCAAGCCGG AAGAAATCGA TGACCTGTGC
GCCCGTGCCG TCACGCCATT CGGTCATACG GCGGCGATCT GCATCTGGCC GCGCTTTGTC
GCCCAGGCGC GTGGCCTGCT TGGCCATGAC GGCCAGGTGA AAATCGCAAC GGTGGTCAAT
TTTCCCTCGG GCGATCTTGA TATTGCGACG GTTGTCGCGG AAACCGAGAC AGCTCTGGCC
GATGGTGCCG ACGAGATCGA TCTGGTCATC CCCTACCATG CTTTTATCGA AGGCGATGAA
ACGGCTGTGG CGGAGATGAT TCGGGCTGTC AGAGCCGTGA TCGCCTCGCC CGCAATTCTC
AAGGTCATTC TGGAAACCGG TGAGCTGAAA AGCGCCGCCC TTATCCGCCG CGCCTCGCAG
ATTGCGATTG CCGAAGGTGC GGATTTCATC AAGACATCGA CCGGCAAGGT TACGGTCAAC
GCCACCCTGG AAGCCGCAGA CATCATGCTC CAGGAAATCC GAGACAGTGG CCGCAAGGTC
GGCTTCAAGC CAGCGGGCGG CATTTCCACG GTCAAGGATG CCAGCCTGTA TTTCCGCCAT
GCCAGCGCGA TCATGGGGGA TGATTGGGTG ATGCCCTCCA CCTTCCGTTT CGGCGCGTCG
GGCCTGTTGA ATGATATTCT GGCCATTCTA TCCGGCGAAA AATCCTCAGG CCCAGCCAGC
GGCTATTGA
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| Protein sequence | MEEQILDSRE LRECAAVALS VLDLTNLKDD CKPEEIDDLC ARAVTPFGHT AAICIWPRFV
AQARGLLGHD GQVKIATVVN FPSGDLDIAT VVAETETALA DGADEIDLVI PYHAFIEGDE
TAVAEMIRAV RAVIASPAIL KVILETGELK SAALIRRASQ IAIAEGADFI KTSTGKVTVN
ATLEAADIML QEIRDSGRKV GFKPAGGIST VKDASLYFRH ASAIMGDDWV MPSTFRFGAS
GLLNDILAIL SGEKSSGPAS GY
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