Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0250 |
Symbol | pncB |
ID | 7387559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 220183 |
End bp | 221487 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643649948 |
Product | nicotinate phosphoribosyltransferase |
Protein accession | YP_002548164 |
Protein GI | 222147207 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.221329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGG CGGATATTGC GAGGCGGGTG TATAACCATG CCTGGAAGCT TGACCCCATC GTGCGCAGTC TGCTCGATAC TGATTTCTAT AAGCTGCTGA TGTTGCAGAT GATCTGGAAG CTCTATCCAG ATGTCGATGT GACGTTTACG CTGATTAACC GCACGACAAG CGTGCGGATT GCCGACGAGA TCGACGAGGC CGAACTGCGC GCCCAGCTTG ATCACGTCCG CACGCTTGGA ATCAGCAAGA AAGAGTTGAT TTGGCTGGCA GGCAATAGCT TTTATGGCCG CACCCAGATT TTCGAGCCGG AATTTCTGGC CTGGCTCTCA GCAATCCGCC TGCCAGCCTA TGAGCTTTCC AAGCGGGACG GCCAATATGA GCTGACCTTC CGGGGGCGAT GGATGGAAAC CACGCTGTGG GAAATCCCGG CTCTCGCAAT CATCAATGAA TTGCGGTCGC GGGCTGCGCT GAAATCGCTC GGTTATTTTA CGCTTGACGT TATCTATGCC CGTGCCAAGG CAAAGATGTG GGAAAAAGTC GAGCGGCTGA AGCAATTGCC AGGCCTGCGG ATTTCCGATT TCGGCACCCG TCGTCGCCAC AGTTTTCTGT GGCAAAGATG GTGTGTGGAA GCCCTGAAGG AAGGCATTGG CGAAGCCTTT ACCGGCACCA GCAATGTATT GCTGGCTATG GATTCGGATC TGGAAGCCGT CGGCACCAAT GCCCATGAAT TGCCGATGGT GGCCGCGGCC CTAGCAAAGA CTGATGCCGA ACTGGCCAAT GCGCCCTATA AAGTGCTTCA GGACTGGAAT ACGCTCTACA ACGGCAATTT GCTGATCGTT TTGCCCGATG CCTTCGGCAC CTCGGCTTTC CTGCGCGATG CGCCGCCCTG GGTGGCGGAT TGGACTGGTT TTCGTCCTGA TAGTGCCCCG CCGATTGAGG GCGGTGAGAG AATCATCGCC TGGTGGGAAA AGATGGGTCG CGATCCGCGC CAGAAACTGC TGATCTTTTC CGACGGGCTG GATGTGGACG CCATCATCGA CACGTACCGT CATTTTGAAG GCCGGGTGCG AATGAGCTTT GGCTGGGGCA CCAACCTCAC CAATGATTTC ATCGGCTGCG CACCCCATGA CATTGCCGGG CTGAAGCCGA TTTCTATCGT CTGCAAGATC ACCGAAGCCA ATGGCCGTCC CGCCGTCAAG CTCTCCGACA ATCCCTTGAA GGCCACGGGA GAACCCGCCG AAGTCGAACG CTACCTGAAA TTCTTCGGGT CCGAGGACCG TGTGGAACAC GCCGTCAAGG TATAA
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Protein sequence | MAKADIARRV YNHAWKLDPI VRSLLDTDFY KLLMLQMIWK LYPDVDVTFT LINRTTSVRI ADEIDEAELR AQLDHVRTLG ISKKELIWLA GNSFYGRTQI FEPEFLAWLS AIRLPAYELS KRDGQYELTF RGRWMETTLW EIPALAIINE LRSRAALKSL GYFTLDVIYA RAKAKMWEKV ERLKQLPGLR ISDFGTRRRH SFLWQRWCVE ALKEGIGEAF TGTSNVLLAM DSDLEAVGTN AHELPMVAAA LAKTDAELAN APYKVLQDWN TLYNGNLLIV LPDAFGTSAF LRDAPPWVAD WTGFRPDSAP PIEGGERIIA WWEKMGRDPR QKLLIFSDGL DVDAIIDTYR HFEGRVRMSF GWGTNLTNDF IGCAPHDIAG LKPISIVCKI TEANGRPAVK LSDNPLKATG EPAEVERYLK FFGSEDRVEH AVKV
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