| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0247 |
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| Symbol | |
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| ID | 7387556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 217019 |
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| End bp | 218647 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649945 |
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| Product | ABC transporter nucleotide binding/ATPase protein (peptide) |
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| Protein accession | YP_002548161 |
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| Protein GI | 222147204 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGC CTCTTCTCTC CGTCCGTGAT CTGTCGGTGG CCTTTCATCA GGGCGAAAGC
CAAAGCCTCG CCGTCGATCA CGTCAGCTTC GACATCGCAC CGGGCGAAAT CCTGGCCCTT
GTTGGCGAAT CCGGCTCCGG TAAATCGGTC TCGGCTGCCT CTATCCTCAA ACTCCTGCCC
TATCCCGCCG CCAGTCATCC CTCCGGCCAA ATCCTGTTTG ATGGCCGGGA TCTGCTGACC
CTGTCCGAGC CGGCTTTGCG GGCCGTGCGT GGCAATGACA TTACCATGAT CTTCCAGGAG
CCGATGACCT CGCTCAACCC GCTGCACAGC ATTGAGCAAC AGATCGGCGA AATCCTCGAA
CTCCACCAGT CGCTGACCGG TGACGCCGCC CGCAAGCGGA CGCTGGAACT GCTGCTTCAG
GTCGGCATCC GCGAGCCGGA AAAGCGGCTC TCGGCCTTTC CTCATGAACT GTCTGGCGGC
CAGCGTCAGC GGGTGATGAT TGCCATGGCG CTTGCCAACC GGCCAAAGCT GCTAGTGGCC
GATGAACCGA CCACGGCGCT GGATGTGACG GTGCAGGCGC AAATCCTGGA GCTTCTGGCC
GGGCTGAAGC GTGAGCATGG CATGTCCATG CTGTTCATCA CCCATGATCT CGGCATTGTC
CGTAAATTCG CTGACCGCGT TTGTGTGATG ACCGGCGGCA AAATCGTTGA GAGCGGCCCG
GTTGAGGCAA TTTTCGCCAA TCCGCAACAT GCCTATACAA GGAAATTGCT GGCATCCGAG
CCGCGCGGTG TGCCGCCGGA AACCGATTTG GCAAAGCCTG TGGTGATGGA AGGGCAGGAG
ATCCGTGTCT GGTTCCCGAT CAAGGCCGGA TTTTTGCGCC GGGTGGTGGA CAATGTGAAG
GCCGTGGACG GCGTCGATCT GACGCTGCGC GCTGGACAGA CGCTCGGTGT GGTCGGCGAA
TCCGGCTCCG GCAAGACCAC GCTGGGTCTG GCGCTGGCGC GGCTGATCTC GTCCCGGGGC
CGGATCGGCT TTCTCGGCAA GAATATCGAT GGCTATTCAT TCAAGCAGAT GCGCCCGCTG
CGCGACCGTT TGCAGGTGGT GTTCCAGGAC CCGTTCGGGG CGCTCAGCCC GCGCATGTCG
GTGGGTGATA TCATTGCCGA GGGATTGCGA GTGCATGAGC GGGGCCTCAC GGCAGCAGAG
CGGGACAGGC GGGTCTGCTG GGCGCTGGAG GAAGTCGGTT TGGATATCGC CACCCGCTGG
CGCTATCCGC ATGAGTTTTC GGGCGGCCAG CGGCAACGTA TCGCCATTGC CCGCGCCATG
GTGCTGAAAC CGCGCTTCGT GATGCTGGAT GAGCCGACCT CGGCGCTGGA TATGACCGTG
CAGGCGCAAG TGGTGGACCT GTTGCGCGAT TTGCAGAGCC GCCATGACCT CGCCTATCTG
TTCATCAGCC ACGACCTGAA GGTGGTGAAG GCGCTGGCCA ATGACATCAT CGTCATGCGA
TCAGGAAAAG TTGTCGAGCA GGGACCGGCG CAGGAGGTTT TCACCGCGCC GAAACAGGAT
TATACCAAGG CCCTTCTTGC TGCCGCATTC GACCTCAAGG CCATGAATAT CGGTGGTGTC
AGCCAATAA
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| Protein sequence | MSAPLLSVRD LSVAFHQGES QSLAVDHVSF DIAPGEILAL VGESGSGKSV SAASILKLLP
YPAASHPSGQ ILFDGRDLLT LSEPALRAVR GNDITMIFQE PMTSLNPLHS IEQQIGEILE
LHQSLTGDAA RKRTLELLLQ VGIREPEKRL SAFPHELSGG QRQRVMIAMA LANRPKLLVA
DEPTTALDVT VQAQILELLA GLKREHGMSM LFITHDLGIV RKFADRVCVM TGGKIVESGP
VEAIFANPQH AYTRKLLASE PRGVPPETDL AKPVVMEGQE IRVWFPIKAG FLRRVVDNVK
AVDGVDLTLR AGQTLGVVGE SGSGKTTLGL ALARLISSRG RIGFLGKNID GYSFKQMRPL
RDRLQVVFQD PFGALSPRMS VGDIIAEGLR VHERGLTAAE RDRRVCWALE EVGLDIATRW
RYPHEFSGGQ RQRIAIARAM VLKPRFVMLD EPTSALDMTV QAQVVDLLRD LQSRHDLAYL
FISHDLKVVK ALANDIIVMR SGKVVEQGPA QEVFTAPKQD YTKALLAAAF DLKAMNIGGV
SQ
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