| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0206 |
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| Symbol | rplT |
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| ID | 7387524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 183757 |
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| End bp | 184161 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649912 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_002548129 |
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| Protein GI | 222147172 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCACGCG TAAAACGCGG CGTTGCCGCT CATGCCAAGC ACAAAAAGGT TCTGAAGGCC
GCCAAGGGCT TTTACGGCCG CCGCAAGAAC ACCATCCGCG CTGCAAAGGC TGCGGTGGAT
CGTTCCAAGC AGTTCGCCTA CCGCGACCGC AAGGTCAACA AGCGCAACTT CCGCGCTCTG
TGGATTCAGC GTATCAACGC AGCTGTGCGC GAATCCGGCC TGACCTATGG CCGCTTCATC
GATGGCCTCA ACAAGGCTGG CATTGAAGTT GACCGTAAGG TTCTGTCCGA CATGGCCATC
CATGAGCCGG CAGCTTTCGG CGCGCTGGTT GAAGCCTCCA AGAAGGCTCT GTCCTACCTC
AAGGACACTG GCACCAAGAA CGAGTTTGAG ACCGCGGTTA AGTAA
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| Protein sequence | MSRVKRGVAA HAKHKKVLKA AKGFYGRRKN TIRAAKAAVD RSKQFAYRDR KVNKRNFRAL
WIQRINAAVR ESGLTYGRFI DGLNKAGIEV DRKVLSDMAI HEPAAFGALV EASKKALSYL
KDTGTKNEFE TAVK
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