Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0199 |
Symbol | |
ID | 7387519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 178265 |
End bp | 179074 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643649907 |
Product | hypothetical protein |
Protein accession | YP_002548124 |
Protein GI | 222147167 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.362941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAATG TCGGACGCCC AATAGAAACC CATGCCATCA CCGTGGGACA GGGAAGCGAT GCGCGCAGCA TAGCCGCGCT GGTACGGGCG CCAGCGCAAG ACGAACGGCC CACCTGCATC TGGCTTGGCG GCTACCGGTC CGACATGACG GGCACCAAGG CACTGGAAAT GGACGATCTG GCCGCGTCTC TTGGAGTTGG AGCAATCCGC TTCGATTATT CCGGGCATGG CGCCTCTGGT GGGGCCTTTC GCGACGGCAC TATTTCCCGC TGGCTGGAAG AGGCTCTTGC CGTTCTCGAT CACTTCAAAC CGGAAAAGGC CATTTTGGTC GGCTCCTCCA TGGGTGGGTG GATTGCATTG CGACTGATCC AGGAACTGAA AGCCCGCCAC GACAATCCGA CCCAGGTGTC CGGAATGGTG TTGATCGCAC CAGCGCCCGA CTTCACGTCG GACTTGATCG AGCCACTGCT TGGCGACCGG GAGCGGGCAG AGCTGGCCGA GAATGGCTAT TTCGAGGAGG TCTCTGAGTA TAGCCCGGAG CCGAATATCT TCACGCGTGC GCTCATGGAA GACGGGCGCG CTAATCGGGT CATGGCCGGC ATGATCGACA CCGGCTGCCC CGTCCATATC CTGCAAGGCA TGGCCGATCC TGATGTCCCC TACCAGCATG CGCTGAAACT GGTTGAACAC CTGCCCGCCG ACGATGTTGT GTTGACATTG GTGCGTGACG GCGATCATCG CCTGTCGCGT CCGCAGGACA TCGACCGGAT GCGCAACGCC ATTCGCGCCA TGATCGAACC ACGGCCATGA
|
Protein sequence | MTNVGRPIET HAITVGQGSD ARSIAALVRA PAQDERPTCI WLGGYRSDMT GTKALEMDDL AASLGVGAIR FDYSGHGASG GAFRDGTISR WLEEALAVLD HFKPEKAILV GSSMGGWIAL RLIQELKARH DNPTQVSGMV LIAPAPDFTS DLIEPLLGDR ERAELAENGY FEEVSEYSPE PNIFTRALME DGRANRVMAG MIDTGCPVHI LQGMADPDVP YQHALKLVEH LPADDVVLTL VRDGDHRLSR PQDIDRMRNA IRAMIEPRP
|
| |