| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0162 |
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| Symbol | |
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| ID | 7388327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 149979 |
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| End bp | 152480 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643649883 |
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| Product | Hemolysin-type calcium-binding protein |
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| Protein accession | YP_002548101 |
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| Protein GI | 222147144 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATATA TTTTGGGTGG AAGTGGCAAC GATACAATCA CAGGCACGTC TGACTATGAC
AACCTCAGCG GAGGCCTGGG CGATGACACC ATCAATGGCG GCGCAGGCAA CGATGTGCTC
TCAGGGAATG GGGGAAATGA TGCAATTTCG GGAGAAGACG GCTCCGATTC CATTCGGGGA
GGCTCAGGCA ACGACAGCCT CTCCGGCGGC GATGGAGTTG ATACTCTTTA TGGCGAAGCC
GGTAATGACA GCCTTTCCGG CGATGCCGGT AACGATGTTC TGAATGGGGG AGCCGGGGCC
GATATTCTTA ACGGCGGCGA TGGCACGGAT ACTGTCAACT ATACGTCAAG CGATGCGATC
AATATAAACC TCGCAACGGG AGTGGCGAGT GGAGGCGATG CGCAAGGCGA TACCTTTGTC
AGCATTGAGG TCATCAGTGC ATCGAGCCAA GACGATGTTC TTGTCGGCGA CGATAATGAC
AATATCTTCA AGGGCGGCGA TGGCAGTGAT ACCATTCATG GTGGTGACGG CGATGACACG
TTAGCGGGCG GCTTCGATGC GGATGTGATC AATGGCGGGA ACGGCTCCGA CACAGCAAGT
TTTGTCGACA ACATGGCTGT GGTGGTCAAC CTCAAAACCG GCGAGATGAG CGGCGATGCC
CAAGGTGATG TCCTGATCGA CATCGAAAAC CTCATGGGCT CCTACTATGA CGACACCCTT
ACCGGTGACG ACGGCAATAA CGTTATCGAT GGATATTACG GTTGGGACCT TTTGGATGGC
GGTTTGGGCG CCGACACCCT CAAGGGCGGG GCGGATGGTG GAGCGGCAGT CTACACCTAT
TCGAACGAAG CCGTGCAGAT CAACATCGAC ACCGGTATTA ACACCGGCGG TTATGCAGAA
GGCGATGTTT TCGAGAAAAT ACTTCAGGTC TATGGCTCTG ATTTCAATGA CACATTCACC
GCCTCGAAAG ATGCCCGATT TGCAGGCGGC CTGGGTGATG ATCACTACAT TGTCAACAGC
TCCTCCGTTT ATCTGATCGA ACAGGAGGGC GAGGGCATCG ACACCGTGAC GACCGGGTTA
AACAGCTATT CTCTGACCAG GAATTTTGAA AACCTCACTT ACACCGGTAC GGCCAATTTC
ACTGGATCTG GAACGGTGGC CGATAACGTG ATGATCAGCG GGGCCGGTGC GGATTACCTG
TTTGGAAACA ACGGTAATGA TACGCTGATC GGTGGTGCCG GCGCAGACAA GTTAAGCGGT
GGCGGTGGCA ATGATACCTC CAGCTATCGT GACTCGACGT CAGCGGTTAC TGTCAATCTG
GCTACGGGTC TTGCGCAAGG TGGATTTGCA CAAGGAGATA CGTTTATCTC TATAGAAAGC
CTGGAAGGCT CTGCATATAA TGATACGCTG ACCGGCAACA GAGAAAGCAA TACACTGCGC
GGCGGCGATG GCGGCGATGT ATTGGACGGC GCGGCGGGCA GCGATACGGC GAGTTACCTG
GATTCGACCA GTGCGGTCAC AGTTAACCTC CAAACCCGCA CGCTATCCGG TGGATATGCG
AATGGAGATA CCATCATCTC TATCGAAAAT CTGGAAGGCT CAACCTATGC TGACAGCCTG
ACGGGAGACG ATCAGGCCAA CGTTTTGACC GGTCGAACGG GAGCGGACAT CCTGGATGGC
GGAGCCGGTT CCGATACGGC AAACTACAGC GACTCCACCG AAGGTGTAAT CATCAATCTC
GTAACTGGTC AAACAGCCGG TGGCTCGGCA GAGGGCGACG TCCTCGTCTC GATAGAAAAC
GTCACGGGTT CCGGCGAAGC CGATTACCTG ACGGGCAATG ATGGTAGCAA TGTGCTTTCA
GGTGGAGAAG GCGATGACCA TCTGATCGGT GGCGGCGGCG ACGATCTGCT GAACGCAGGC
AGCGGCGCGA ACATTCTGGA TGGCGGCGAC GGCAGCGATA CCGCAAGTTA CGCCGACTCT
TCCGTTGGTA TCAGCGCAAG CCTCTCCGGA GACGCAGGCG TCGGCGGTTC GGCAGAAGGT
GATGTGCTGA TCTCCATAGA AGCGTTGGAA GGTTCCTTTT ACGCCGACAC TCTTTCGGGA
AGCGGATATG CGGACGTTCT TAAGGGTGGC GAGGACGCTG ATACGCTCTT TGGTCTTGAA
GGTGACGATT CGCTTCATGG CGATGGCGGT GATGACGTCC TTTATGCGGA CGCTGGCGAT
GACACGCTTG CCGGTGGTGA AGGCGACGAT GCCCTCTACG GCGGTGAAGG TAGCGATGTG
TTCGTGTACA GCTCAAACTA TGGCAATGAT GTGATTTTCG ACTTTGACTC GTCGGCGGAC
ACGATCGATC TGACCGACAT GGGCTTTGCC ACCGTCAGCG ATGCCGCCGC CTATGCAACC
GAGATCGAGG ACGGCGTGCT GTTCACCTTC AGTAACGTGG ATACGCTGAC AGTGCATGGC
TTGAACTATG CAAGCCTGAC ATACAGCGAT ACATTGATGT AA
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| Protein sequence | MVYILGGSGN DTITGTSDYD NLSGGLGDDT INGGAGNDVL SGNGGNDAIS GEDGSDSIRG
GSGNDSLSGG DGVDTLYGEA GNDSLSGDAG NDVLNGGAGA DILNGGDGTD TVNYTSSDAI
NINLATGVAS GGDAQGDTFV SIEVISASSQ DDVLVGDDND NIFKGGDGSD TIHGGDGDDT
LAGGFDADVI NGGNGSDTAS FVDNMAVVVN LKTGEMSGDA QGDVLIDIEN LMGSYYDDTL
TGDDGNNVID GYYGWDLLDG GLGADTLKGG ADGGAAVYTY SNEAVQINID TGINTGGYAE
GDVFEKILQV YGSDFNDTFT ASKDARFAGG LGDDHYIVNS SSVYLIEQEG EGIDTVTTGL
NSYSLTRNFE NLTYTGTANF TGSGTVADNV MISGAGADYL FGNNGNDTLI GGAGADKLSG
GGGNDTSSYR DSTSAVTVNL ATGLAQGGFA QGDTFISIES LEGSAYNDTL TGNRESNTLR
GGDGGDVLDG AAGSDTASYL DSTSAVTVNL QTRTLSGGYA NGDTIISIEN LEGSTYADSL
TGDDQANVLT GRTGADILDG GAGSDTANYS DSTEGVIINL VTGQTAGGSA EGDVLVSIEN
VTGSGEADYL TGNDGSNVLS GGEGDDHLIG GGGDDLLNAG SGANILDGGD GSDTASYADS
SVGISASLSG DAGVGGSAEG DVLISIEALE GSFYADTLSG SGYADVLKGG EDADTLFGLE
GDDSLHGDGG DDVLYADAGD DTLAGGEGDD ALYGGEGSDV FVYSSNYGND VIFDFDSSAD
TIDLTDMGFA TVSDAAAYAT EIEDGVLFTF SNVDTLTVHG LNYASLTYSD TLM
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