Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0127 |
Symbol | |
ID | 7388301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 117038 |
End bp | 117499 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649857 |
Product | Acyl-Coa thioester hydrolase protein |
Protein accession | YP_002548075 |
Protein GI | 222147118 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGTAT TGATGACGCC GGATATGGCG AATTTTTCCG GCAAGGTGCA TGGCGGTGCG CTGCTGAACA TTCTCGACCG GGTCGCCTAT TCCTGCGCCT CGCGCTTTTC CCAGCAATAT GCGGTGACGC TGTCGGTGGA TCAGGTGGTG TTCCGTCAGC CGATCCACGT CGGTGAACTC GTGACGTTCC GCGCATCGGT CAATTATGCC GGGCGCACAT CAATGGAAAT CGGCATTCGG GTCGAGGCGG AGGAAATCCG CACCGGTGAA CGCCGCCATA CCAATTCCTG TTACTTCACC ATGGTTGCCG TGGATGCCGA GGGCAAGCCG ACCGCCGTTC CATCCTTCTG TCCCGAAACG CCGGCGAAAA TCCGGCGGGA AAAGGCGGCC CGTGAGCGTC GCGCCCTGCG TCAGGAATTC GAGCATCGTT TCAAGCAGGT CAAGTTGTCC GGTCAGGACT AA
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Protein sequence | MVVLMTPDMA NFSGKVHGGA LLNILDRVAY SCASRFSQQY AVTLSVDQVV FRQPIHVGEL VTFRASVNYA GRTSMEIGIR VEAEEIRTGE RRHTNSCYFT MVAVDAEGKP TAVPSFCPET PAKIRREKAA RERRALRQEF EHRFKQVKLS GQD
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