Gene Avi_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0102 
SymbolcycM 
ID7388283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp98774 
End bp99331 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content59% 
IMG OID643649839 
Productcytochrome c 
Protein accessionYP_002548057 
Protein GI222147100 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.108181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCCT ACATGAATAT GGGAGCAGGC GCACTGCTTG GTACGATCTT CGTACTGATG 
TCAGTGTCCA TTGCGTCGGA GGGGATTTTC CACGCGCCGA CCCCCGAAAA GGAAGGCTAT
GCCATCGTGG CTGCCGAAGC GCCTGCCGCT GGCGGCGCGG AAGGTGCGGC ACCAGCCGCA
GCCGACAAGC CGATTGCGGA ACTGCTGGCA TCGGCAGACG TCAAGGCTGG CGAGGCCATT
TTCAAGAAAT GCACAGCCTG TCATAGCGTC GACAAGGGCG GAGCCAACAA GGTTGGACCC
AACCTTTGGG GCGTTGTCGA CCGGCCCGTC GCCAGCCATG AAGGCTTTGC CTATTCCGCC
GGTATGAAGG ATTTCTCCAA AGGCAGCTCC GAGCACTGGA CCTTTGAAAA CCTCAACCAC
TTCCTGACCG CGCCAAAGAA ATTCGTGGCG GGTACGGCGA TGGGCTTTGC CGGTATTCCC
AAGGAACAGG ACCGCGCCAA CCTGCTGGTG TATCTTCACA ACCAGTCCGA CAATCCGGTG
GCGTTACCGA CCAATTGA
 
Protein sequence
MNSYMNMGAG ALLGTIFVLM SVSIASEGIF HAPTPEKEGY AIVAAEAPAA GGAEGAAPAA 
ADKPIAELLA SADVKAGEAI FKKCTACHSV DKGGANKVGP NLWGVVDRPV ASHEGFAYSA
GMKDFSKGSS EHWTFENLNH FLTAPKKFVA GTAMGFAGIP KEQDRANLLV YLHNQSDNPV
ALPTN