| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0041 |
|---|
| Symbol | |
|---|
| ID | 7389039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 30977 |
|---|
| End bp | 31411 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643649783 |
|---|
| Product | peptidyl-tRNA hydrolase domain protein |
|---|
| Protein accession | YP_002548007 |
|---|
| Protein GI | 222147050 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1186] Protein chain release factor B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCG ACCCGCTCTA TATCAATGAC AGGATTACGA TTGCCGGTTG GGAACTGACC
GAGCAATTCG TGCTGGCCGG TGGTCCGGGC GGGCAAAATG TCAACAAGGT CTCGACCGCC
GTCCAATTGT TCTTCCCGCT GACAAGCTCT CCCTCGCTCC CGGACCGTAT CAAGACCAAT
GCCATCAAAT TGGCGGGCCG ACGCCTGTCC AAAGAAGGCG TGTTGTTGAT CGAGGCAAGC
CGCTTTCGAA GCCAGGAGCG CAATAGGGAA GATGCCCGCG AGAGGCTGAA GGAATTGCTG
CTCGAAGCAG CCAAACCACC GCCACCGCCG CGCCGGAAGA CCAAACCCAC CAAGGGCTCA
ATCGAGCGCC GGTTGAAGGC AAAGGTGGGA CGCGGCGAAA TCAAGAAAAT GCGCGAGAAG
CCGGATCAGG ATTGA
|
|---|
| Protein sequence | MASDPLYIND RITIAGWELT EQFVLAGGPG GQNVNKVSTA VQLFFPLTSS PSLPDRIKTN
AIKLAGRRLS KEGVLLIEAS RFRSQERNRE DARERLKELL LEAAKPPPPP RRKTKPTKGS
IERRLKAKVG RGEIKKMREK PDQD
|
|---|
| |