| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0028 |
|---|
| Symbol | trxA |
|---|
| ID | 7389028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 22379 |
|---|
| End bp | 22699 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643649772 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_002547996 |
|---|
| Protein GI | 222147039 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACGG TAAAAGTCGA TGCAAGCAAT TTCGAAGCGG AAGTTCTACA GTCTGTAGAG
CCTGTCGTGG TGGACTTCTG GGCCGAATGG TGCGGCCCCT GCAAGATGAT AGCCCCCAGC
CTGGATGAAA TCTCCACGGA AATGGCTGGC AAGGTCAAGA TCGCCAAGCT CAATATTGAC
GAAAACCCAG AACTCGCCGC CAAATTCGGC GTCCGCTCCA TCCCAACACT CGCCATGTTC
AAGGGCGGCG AAGTGGCTGA CATCAAGGTT GGCGCTGCCC CGAAGACGGC TCTGTCCAGC
TGGATCGCCG GCGCCGCTTG A
|
|---|
| Protein sequence | MATVKVDASN FEAEVLQSVE PVVVDFWAEW CGPCKMIAPS LDEISTEMAG KVKIAKLNID
ENPELAAKFG VRSIPTLAMF KGGEVADIKV GAAPKTALSS WIAGAA
|
|---|
| |