Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_D0004 |
Symbol | |
ID | 8952391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_014000 |
Strand | - |
Start bp | 1679 |
End bp | 3643 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003541127 |
Protein GI | 292905256 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAAA GGAAAAATAA TGGTGGTATT CCTAGATTTT TTGACCTACC ACAAAGTAGC AAAGTATCTT TTAAGGTTCC CGGTAAAAAA TCAAATCGTC GCAGATTACC CGATGGCAAT TATCTTGATG ACGATGCGAT CGCACCACGA CTAGATTTTA TAGAAGATTT TGAACTTACT GTTACTGGAG CGCCGAGAGT CTTTAGTCCA GAGCAAGAAT ATAATTATAA ATCTGCGTGG AAGAGATACC AAAAAGGTAT GGAGATAGCC CAAGAAGATA AAGTATTGAA AGACGGTGAT GATAAATATA AAATACCTTC CCCGAATGCA CCCAAGGGAT ACTGGGAAGT CAGCAAGAAA CCTCAAAATA ATATTACTTG TGAATTGCCT TTGCTTTTAA ATCTTCCTAA ATGGTTTGTT GGGGATATAA GATTTGATGG AGATTTTGAA ACTATAAACA CTCCAGCAAA TGTAGTAGCT CAAAGTTATG ATAATCAGAC AGGATTGTAT ACAGCCACTA TTATTGAAAC TATTAGTATT ACAGCCGATA GTGAAGGTAT AGTTAATAAC GATGCTTTGA TAATTATTAA TTCAACAGGT GGCGCTTTTA ATGATGGTTC ACCTGTAAAA ATCACCTCAA AGGTTATTAC AACTCATCCC GGTGGTGGCA TTAGTATTGG CAATTCTATA TACAAAGGAA CACTTGTACC ACCTTTTGGC GGTAGAGTTC CAGACCCGGA AAGTGGATTT GAATTAAAAG AATGGGTGTT TGATACCTTT AGCAATGAAG AACAAACAGA GTTAGAATTT ATAAATAATT CCGAATTTAC TACTGGAACA AACAGAGAAG ATTACGTAGG CTTTACATTA GAAACTACTG TTGCTGGTGG TTTTGCCTCT GAAACATTTC CAGAATGGGA AGTAACTTTT GAAGTAACAG TAGAAATTTA TCTATTTCCT GGTGGATTAG AGTTTACATT TGAACCATAC TTTGATGATG AGCTACTTAA TAACTATCGA CCAGGAATAG TTTTTAATGA AGAAACTGGA GAAATTGAAT ATTTTCCGAA CGGAGAAAAC ACGGCAACAG GTGTAATAGA TGGTGCAAAT GTTAGCTCTA TTTATACTTG GCAATCTAAT TTTGATAAAA GCAATATAGT AACTAGTAGT GTAAAAATAG AAAAAACTTG CAATCAAGCA ACCAATGTAT CTGGTTTTAC TCTTAGGTCT AGTGGGGCTA TAGATTTTAA TTCTGAACTT AATATTAATA AAATAAGTGG CGTTCTTTCT TGGACAATAT CACTAAGCTA TAGCGGTGCA GAAATATATC CAAATGACCC TATTGATGCA CTCTTTACTC AACAATATGT AGAATTTTCT GGTGAGAATT TTACAGAAGA TGACAAAGAA TCTTATAGCA ATGGAAGTCT TGTTTCATTG GAACAAAACA ATTTAACTTA TCAACATGAA TTTAGTGTAA ATTTTAAATA CCTAGAAGGA GGGGGGCAGT TTTCAGCATT CTTAACTCAG CAAGTAAGAA TATTTGAAAT TGAATTTGCT GATGGTAGTA AATGGGAATG TGGTAATGCT GACGGTGACG GTGACGGTGA CGGTGACGGC GACGGTGATA GTGACGGTGA TGGCGACGGT GATTGGCAAT GCAACTGCCC TGACGCAACC AAGAAAAAAT CCCCCAACCC CAACAGCACA TCAGATGACG GAATAGAAGA AGACTGGAGT AATACCGATG CTGGCGCACA AGATGGGCAG TGTAAGCACA TCTGGGCTGT GAGGATCGTG CTGAATGATG TAGCGCCAGA GGAAATTCCT ACAGATATGC CCATTAGTGA AAATTTCCCA AATGGTAACG GGAACAGTAC TAACCCCAAA GTCATTGGGG GAAATGGTGG AATAGGATTT GATGGATGGA ATCCAGGCAA AAGAAGGAGG GGGAAGAATG CCTAA
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Protein sequence | MGKRKNNGGI PRFFDLPQSS KVSFKVPGKK SNRRRLPDGN YLDDDAIAPR LDFIEDFELT VTGAPRVFSP EQEYNYKSAW KRYQKGMEIA QEDKVLKDGD DKYKIPSPNA PKGYWEVSKK PQNNITCELP LLLNLPKWFV GDIRFDGDFE TINTPANVVA QSYDNQTGLY TATIIETISI TADSEGIVNN DALIIINSTG GAFNDGSPVK ITSKVITTHP GGGISIGNSI YKGTLVPPFG GRVPDPESGF ELKEWVFDTF SNEEQTELEF INNSEFTTGT NREDYVGFTL ETTVAGGFAS ETFPEWEVTF EVTVEIYLFP GGLEFTFEPY FDDELLNNYR PGIVFNEETG EIEYFPNGEN TATGVIDGAN VSSIYTWQSN FDKSNIVTSS VKIEKTCNQA TNVSGFTLRS SGAIDFNSEL NINKISGVLS WTISLSYSGA EIYPNDPIDA LFTQQYVEFS GENFTEDDKE SYSNGSLVSL EQNNLTYQHE FSVNFKYLEG GGQFSAFLTQ QVRIFEIEFA DGSKWECGNA DGDGDGDGDG DGDSDGDGDG DWQCNCPDAT KKKSPNPNST SDDGIEEDWS NTDAGAQDGQ CKHIWAVRIV LNDVAPEEIP TDMPISENFP NGNGNSTNPK VIGGNGGIGF DGWNPGKRRR GKNA
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