Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0236 |
Symbol | |
ID | 3678035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 285538 |
End bp | 289209 |
Gene Length | 3672 bp |
Protein Length | 1223 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637715316 |
Product | helicase-like |
Protein accession | YP_320510 |
Protein GI | 75812893 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.126273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00335967 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGCGG AAGATTTAGG AAGATTATTT GAAATCGGCT TCAATGTTGG CATCCTTGCT TATATTCAGC AAAACCAATT GAATCACCGA TTCAGAGATT TATATCAATG TGACTTACAA GCATTGCGGT TTCCACAACT GCATCGACGT ATAGTTGACC GCGCTAACGT AATTAATGAT AGTGATAGTA AAATCATTGC TAAGTGGAGT GTGTTCTTTC TCCAAAAGGG GTTTTTATCC GGCTTAAATT TCTTTAGGGA GTACCTGGAA TCAACAGGTT GGAAACAGCG AAAGCTGGAA ATTTTATACT ACCAGTGTAA CTTTTGTGAT GACAACAGCC TTGGTATTCT TGTTAAGGGT GAGGAACAAG TCTTTAGAGA TATCTTGTCA CAATTAGGAA ATATCAAGGT TGATATCGGT CGCTATAAGC AGCAAGGAGA GTTTCTTAGG GCTGATACTT TAATGCTGCT GCACAACGGC AAACAGTTTC GTATCCTCTC AGTGGATTTA TCAGTGTTCT CGATTAAGTC AGCTGAAGAT ATTAAAGATT TAGATAATGT AGAAGTTATA CGGCAATTAC TGCTCAGTGA AATTAGTTAT TTACGCTCAA AAAGTGTTTT CTCTGGACTT AGTATCGACA CGGGAACAGA CACCACAAAA CTTGGATTAA CCTTTTCTGA AGGGATTGCT CGTTATTTCA CAGCTTTCAA GCGCAAGGAC AAAGAGAGTG TCAAATTAAT CCAAGCCGCC AGTTATGCTC ATAGCTTCTA TAAGTTTTTA CGACAGCACT CTCTTCTCCA AGAAGCTGAC TCCGTGATGT TTAACGTTAT GGGTTACACT GACCGGGGCG TTAGTGCCAT GTCAGTAAAT CGAGAAAATT TAGATATCTT AAATACCTGC CACCGCATTT ATAAGCAGCA ACAAAGCGGT CAAGCGATCG CCGAAGCTCG TCAACAAGTT CTCAGAATCA TCAAAAGGAA AGCAGCTGAG AGTTTTGTTG ATGGCAAGAC ATTTATAAAC TCTCTTTTAG CAGTGCCACC TGACACAACT ACTTTGGTTG CTCACCAGGA GCGAGTAACA GGGTTTTTCA ACTCAAGCGG GGAAGTGCCG CCTCAATTAA TGGCTCAACT CGGACTGAGT GGTAGTCTAG ACCTACGTTC GGCTCACACC GCCCTAATTC AAACTGCCCT GACTAATGAC AATCCTTATG TTTTCTTAAC TGGCAATCCT GGCATTGGTA AAACCACAAC CATTGTAGAA TTTCTCAAAC AGCATCTCGA CGATGGCTTT TTGTTCTTCT ATGTCAGTCC CAGAAAAAAC GTTAACAAGG ACGTAATTGA GAAGTTCAAG AGTCAACCGG GAGAATCATT GGGCGGGAGC ATTGCAGCAC CATTGGAGAA TCACGGACTG TTTTGCATCA ATACCAATGC AGACATTATT CAAGCTAATG GTGGACACTG TACTGTGCAG TATTTCTCTA ATTTACGAGA AGGGGACTTT ACAGAGCAAG CTGTTCATTT TATCGATGGT CAAGCTCTTA TTGAGCGGCG TCCCTCAGCT TCTCAAAGAC TCCAGCGCAA AATGGAAGAT TTAATTCAGG ATGCTGGTGA GCAGACTAAA GGAGTTTTAG ATAGTATCTG TGAAGCTATT TACACAATTA TAGACCGTCA ACTTTCCAAT AATATAGTGG CAACAATTTC GCTACAATCT TTGAAAAAAA CGGGAAACGG CCAAGACACT CTCCGCCATT TTGAGAAGAT ATTTAGGAAC GCCTATAACC AAAGTGAAGG TTCAGTCATT CCTGACCAAA TGAAGAAAAT CTCTCAACGC ATTAAACATA TATTTATCAT GGTTGATGAG ATTACAGGAG ACCATAGCGG TGTAGAATTC TTAAACCGCA TCAGTTCTAT CCTTCGCCAA TATGAGCTGA CTAATTCCCA ATATGGCTTT AATACCAAAA TTATTGTAGC TGATGCTTCT ATTGTTGACC CAGATGTCAT TCAACAGCAT CTTTCTACTA CAGTTTCAGA ACCAGACAAA ATCTTTTATC GGCGAGCGTC AGAGAACGAA TCACCCCTTT CAGTACAAAA TTTCAAGTTT AAGGGATTAG GCGCAACTGT CATCAATTCT AACTCTTACC CTGCTCGTAG TTTAAACATT ACTTATAAAG TATTTATAGA ATCTTTTAAA TATAGCAATT CAGCTTTTTT AGAGAAAAAC AATAGCTTAG TTAACCGTGT ACAAGCAGAG ATTGCTGAAG ATATTAATTC TTTCTTGGAT AACCCAGAAG CTGGACAGGT AATTGTATAT ATCCAGGATA AGCAGAGATT AAAAGAATTG ACTGAATATC TAAAAAAACA TCGACGTAAT TTTCAGTTAT TTACGGACTA CTTAGAAATT CACGCTAATA TTTCAGAGCA GGAAAAAGAA GAAATCCAAA AATGTAATAC TGACGTAAAA GTGGTCTTTA TGACCGCCTC AGCTAGTCGA GGGTTATCAT TTCCTAAAGC TAAACATATT CTGGTTGATA TTCCTCGCTT TGCCATTGAG CAAAACTTAA TGGAAATTAT TCAGGTAATT TACCGGGGTC GCGGTAACTA CCTTGAAGAT GGAATGACCA AAACCCTAGA TAATGAGGAG AAAGATTTAA TTCTTTATTT ATCAGAGCGG GCTGTATATT ACGCTGATGA CCCGGAGCTT TCTTTACAAG AAAGTGTGCT GAGTCTTGTG AATATTCTAT TAATTTTCAA GACATCTGTC ATGACAAGAA TTTCTGGGTC TGGGCAGATA GGTAAAGACC ATTTTATGAT GATTCCTATT GGGGGAAAGT CGGTATTTGC AGCAGGTGAA ACCTTTACGA GTAAGATATC TGGTTTAATC AAAGAACTGA AGAAAGAGCA TATTCGTCGT CGCAGTGACA AACTTTTGAA AGAGGTTTAT ACGAGCCTAG AGCAACTGTT AGGTCGTGTA AAGATTATCT TGAGTGATTT AGACAATTCC CCGCCGACAC CAACCCTTTC TTATCTGTCA ATGCGAGAGT CCTTTGCAGA CCAGTTTGTG AAGTTGGTAA GTAGTGGTTT GGATCAGCTA TTAAGCTTTG GCCCTGTAGA AGCCAGCCAC ATTAGTGGCA GTATGCTAGT AGTTTCTTTA GCTAATAAAG CACTTCAAGA AAACTATGAA ATGCGTCTAG AGCGAGAACT CAAACCTTAT GCTAATAATG AACTTTTAAA AAAGTTATAT TCTATTAATT CTAATCAAGC CTATCCAGAA AATTTGCGTT CAGCAAGTTT TGGAGCAATT GAGCTAGTTA ATTTACTTGG AAAACAAATG AGGCGAACAC AGTGGTTTGA GCAAAATAGT CAGCGTTTTG ACCAGTATTA TGCAATTCCA CTATTTATAT TTACCAGCAA TGAAGCGATT AAAGACTATT TTTCTAGGGG TGTAGAGGAG CCAGATGGAG AATCATTCCG AGATATTTTA GCTGAATATA TCCGTTGTAT GTTTCCTGTA GACAACATTT TGCCCATTAG CTCTCAGTAC GGAGAATTTC CATTTGTTGT TTTTAGGAGC TATAGTTTAA GCGAAATTAG GCACAAGTTA TTCACAGATA AGCAGCTTTT GACTTCCAAT GAGTTGAATA TATTAAACTT GATTCTTGCT CAAGAAGACT AA
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Protein sequence | MIAEDLGRLF EIGFNVGILA YIQQNQLNHR FRDLYQCDLQ ALRFPQLHRR IVDRANVIND SDSKIIAKWS VFFLQKGFLS GLNFFREYLE STGWKQRKLE ILYYQCNFCD DNSLGILVKG EEQVFRDILS QLGNIKVDIG RYKQQGEFLR ADTLMLLHNG KQFRILSVDL SVFSIKSAED IKDLDNVEVI RQLLLSEISY LRSKSVFSGL SIDTGTDTTK LGLTFSEGIA RYFTAFKRKD KESVKLIQAA SYAHSFYKFL RQHSLLQEAD SVMFNVMGYT DRGVSAMSVN RENLDILNTC HRIYKQQQSG QAIAEARQQV LRIIKRKAAE SFVDGKTFIN SLLAVPPDTT TLVAHQERVT GFFNSSGEVP PQLMAQLGLS GSLDLRSAHT ALIQTALTND NPYVFLTGNP GIGKTTTIVE FLKQHLDDGF LFFYVSPRKN VNKDVIEKFK SQPGESLGGS IAAPLENHGL FCINTNADII QANGGHCTVQ YFSNLREGDF TEQAVHFIDG QALIERRPSA SQRLQRKMED LIQDAGEQTK GVLDSICEAI YTIIDRQLSN NIVATISLQS LKKTGNGQDT LRHFEKIFRN AYNQSEGSVI PDQMKKISQR IKHIFIMVDE ITGDHSGVEF LNRISSILRQ YELTNSQYGF NTKIIVADAS IVDPDVIQQH LSTTVSEPDK IFYRRASENE SPLSVQNFKF KGLGATVINS NSYPARSLNI TYKVFIESFK YSNSAFLEKN NSLVNRVQAE IAEDINSFLD NPEAGQVIVY IQDKQRLKEL TEYLKKHRRN FQLFTDYLEI HANISEQEKE EIQKCNTDVK VVFMTASASR GLSFPKAKHI LVDIPRFAIE QNLMEIIQVI YRGRGNYLED GMTKTLDNEE KDLILYLSER AVYYADDPEL SLQESVLSLV NILLIFKTSV MTRISGSGQI GKDHFMMIPI GGKSVFAAGE TFTSKISGLI KELKKEHIRR RSDKLLKEVY TSLEQLLGRV KIILSDLDNS PPTPTLSYLS MRESFADQFV KLVSSGLDQL LSFGPVEASH ISGSMLVVSL ANKALQENYE MRLERELKPY ANNELLKKLY SINSNQAYPE NLRSASFGAI ELVNLLGKQM RRTQWFEQNS QRFDQYYAIP LFIFTSNEAI KDYFSRGVEE PDGESFRDIL AEYIRCMFPV DNILPISSQY GEFPFVVFRS YSLSEIRHKL FTDKQLLTSN ELNILNLILA QED
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