Gene Ava_C0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0210 
Symbol 
ID3678130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp248315 
End bp248965 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content45% 
IMG OID637715290 
Productpeptidase M23B 
Protein accessionYP_320484 
Protein GI75812867 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00116461 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0105886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATAA TCTTTGAAAC TGACGGTAAA AAGGAGGTTA GTAATTCGAC TGTAACTAGT 
TTGGATGAGA CAGCCGATAC TAATTCCAGT GAAAGTTGGA GATATGCGAT CGCCACTTCA
GTTGTCATTG CAGCTATGGT CATTCCCCAG GTTTCTGGAT GGATTGAATC TCAATTGTTA
GTTAAATCTC TCCAGAATCT AATACTACCT AGAACTGTTG TTAGTAATAA GGTTTTAAAT
AACGGTCGAA TTGCCTTTCC TACTGCGGCT GGTACTCCTG TAACTAGTGA ATTTGGTTGG
CGCACACACC CCATTACAGG CGATCCCAAG TTTCACAGGG GAATTGATTT TGGCGCAGCC
AAGGGTACGC CAATTTATGC GGTTGATGCT GGCCGAGTAG CTTTTGCGGG TGACAAGGAT
GGTTACGGCA AAGCAGTTAT TATTCAGCAT CAGGGAAGTT TATCTACTCT CTACGGTCAT
GCCAGTCAGC TGTATGTACA GCAGGGACAA CTTGTTGTCC GTGGGCAGAT GATTGCAGCA
GTAGGTAGTA CGGGGTTTTC GACGGGGCCG CATTTACATT TTGAGGTTCA CGTTAATGGT
GTAGCACAGA ACCCCCGCCC TTATTTACAC GAGTATTTAG CAAACCGTTG A
 
Protein sequence
MRIIFETDGK KEVSNSTVTS LDETADTNSS ESWRYAIATS VVIAAMVIPQ VSGWIESQLL 
VKSLQNLILP RTVVSNKVLN NGRIAFPTAA GTPVTSEFGW RTHPITGDPK FHRGIDFGAA
KGTPIYAVDA GRVAFAGDKD GYGKAVIIQH QGSLSTLYGH ASQLYVQQGQ LVVRGQMIAA
VGSTGFSTGP HLHFEVHVNG VAQNPRPYLH EYLANR