Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0210 |
Symbol | |
ID | 3678130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 248315 |
End bp | 248965 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637715290 |
Product | peptidase M23B |
Protein accession | YP_320484 |
Protein GI | 75812867 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00116461 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0105886 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATAA TCTTTGAAAC TGACGGTAAA AAGGAGGTTA GTAATTCGAC TGTAACTAGT TTGGATGAGA CAGCCGATAC TAATTCCAGT GAAAGTTGGA GATATGCGAT CGCCACTTCA GTTGTCATTG CAGCTATGGT CATTCCCCAG GTTTCTGGAT GGATTGAATC TCAATTGTTA GTTAAATCTC TCCAGAATCT AATACTACCT AGAACTGTTG TTAGTAATAA GGTTTTAAAT AACGGTCGAA TTGCCTTTCC TACTGCGGCT GGTACTCCTG TAACTAGTGA ATTTGGTTGG CGCACACACC CCATTACAGG CGATCCCAAG TTTCACAGGG GAATTGATTT TGGCGCAGCC AAGGGTACGC CAATTTATGC GGTTGATGCT GGCCGAGTAG CTTTTGCGGG TGACAAGGAT GGTTACGGCA AAGCAGTTAT TATTCAGCAT CAGGGAAGTT TATCTACTCT CTACGGTCAT GCCAGTCAGC TGTATGTACA GCAGGGACAA CTTGTTGTCC GTGGGCAGAT GATTGCAGCA GTAGGTAGTA CGGGGTTTTC GACGGGGCCG CATTTACATT TTGAGGTTCA CGTTAATGGT GTAGCACAGA ACCCCCGCCC TTATTTACAC GAGTATTTAG CAAACCGTTG A
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Protein sequence | MRIIFETDGK KEVSNSTVTS LDETADTNSS ESWRYAIATS VVIAAMVIPQ VSGWIESQLL VKSLQNLILP RTVVSNKVLN NGRIAFPTAA GTPVTSEFGW RTHPITGDPK FHRGIDFGAA KGTPIYAVDA GRVAFAGDKD GYGKAVIIQH QGSLSTLYGH ASQLYVQQGQ LVVRGQMIAA VGSTGFSTGP HLHFEVHVNG VAQNPRPYLH EYLANR
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