Gene Ava_C0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0196 
Symbol 
ID3677996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp232357 
End bp233163 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content36% 
IMG OID637715276 
Producthypothetical protein 
Protein accessionYP_320470 
Protein GI75812853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00122659 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTTGGAA AGCGTTTTAT AATTACATCG GGTGATGCTC GTGTGGGTAA GTCCACAGTT 
TCTCGGCTCT TGCTGGAATT GTACTTGAGA AGTAAATGCA ATGCGCGTGT TTTCTACCAC
GGTTATCGTA ACAAGCTATC GATGTATAAA ACAAAAGGTT TTGAAATAAA CCATTTGGGA
TTGTCTAGGG GCGATTCGGA TAGATTATTA CTTGACTTAG AAATGTTTCC AAATATTGAT
GTAGTTTTGA CGGATATGCC AGGTCAAAAC CACCAAGAGT TCAAATTTTT TGATAAAGAT
GTTTCACTGA TAGGAAATCT TAACCATCTC GGATATCGTG TTACTTTCTT GCACCCAATA
TCACATCGTA AAGACTGTGT TGAAGATTAT CTTGAGGATT TATACCAGCA TTTTGGTAGT
CAAGTTGACT ATGTTGTTAT CAAAAATTAT TACTTTGGCA AGCAATTTCG ATACTATGAA
GGTAGTAGAT TCCAAGCTGA TATTAAAAAT TTAAATGGCT TGGAGCTAGT TTTGGGCGGG
TTGCATAACG ACTTTTACCA GTTGCTTGAG GATACTGGTT TACCCTATGC TCAACTTATT
GGAACTGACT CCCCTCTTAA TACTATTCAG CGTTCAATAG TATTCAACTG GATGGAGAAT
TTTCAGAATT CTGTTATTTC TAATGCGATC GCTTCTAATT ATTTAGGGCT AAGTAAGAAC
TGTACAGAAC TAGCTTCTGT AAGTGCAAAT CAACAAAATA ATTCCAATTT TGATGTAAAT
GAAGATATTG AATCTGAAGA ATGGTAA
 
Protein sequence
MFGKRFIITS GDARVGKSTV SRLLLELYLR SKCNARVFYH GYRNKLSMYK TKGFEINHLG 
LSRGDSDRLL LDLEMFPNID VVLTDMPGQN HQEFKFFDKD VSLIGNLNHL GYRVTFLHPI
SHRKDCVEDY LEDLYQHFGS QVDYVVIKNY YFGKQFRYYE GSRFQADIKN LNGLELVLGG
LHNDFYQLLE DTGLPYAQLI GTDSPLNTIQ RSIVFNWMEN FQNSVISNAI ASNYLGLSKN
CTELASVSAN QQNNSNFDVN EDIESEEW